Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17420

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
3,846,665	+				-0.4
3,846,691	+				+0.6
3,846,691	+				-1.1
3,846,691	+				+0.3
3,846,691	+				+0.3
3,846,691	+				-0.9
3,846,691	+				-0.7
3,846,691	+				-0.6
3,846,692	-				-1.9
3,846,692	-				+1.4
3,846,692	-				-0.4
3,846,692	-				+0.3
3,846,692	-				+0.2
3,846,692	-				+0.2
3,846,692	-				+0.2
3,846,703	+				-1.8
3,846,703	+				+0.9
3,846,703	+				+0.7
3,846,703	+				-1.0
3,846,703	+				-0.5
3,846,704	-				-0.6
3,846,704	-				+0.2
3,846,704	-				-0.6
3,846,704	-				+0.6
3,846,704	-				-1.0
3,846,774	-				-0.8
3,846,835	-				+0.3
3,846,835	-				-0.7
3,846,835	-				-0.7
3,846,888	+				+0.1
3,846,888	+				+0.6
3,846,888	+				+0.6
3,846,889	-				+1.0
3,846,889	-				-1.0
3,846,959	+		AO353_17415	0.24	+1.6
3,846,960	-		AO353_17415	0.24	-0.8
3,846,972	+		AO353_17415	0.28	+0.2
3,846,973	-				+2.9
3,846,973	-		AO353_17415	0.28	-0.2
3,846,973	-		AO353_17415	0.28	+0.7
3,846,973	-		AO353_17415	0.28	-0.8
3,846,973	-		AO353_17415	0.28	-0.7
3,846,973	-		AO353_17415	0.28	+0.1
3,846,973	-		AO353_17415	0.28	+1.2
3,846,973	-		AO353_17415	0.28	+0.3
3,847,041	+		AO353_17415	0.48	-0.0
3,847,042	-		AO353_17415	0.48	-0.8
3,847,042	-		AO353_17415	0.48	+0.2
3,847,074	+		AO353_17415	0.57	+0.4
3,847,074	+		AO353_17415	0.57	-0.4
3,847,074	+		AO353_17415	0.57	-0.4
3,847,074	+		AO353_17415	0.57	+0.2
3,847,074	+		AO353_17415	0.57	-1.1
3,847,074	+		AO353_17415	0.57	-1.9
3,847,074	+		AO353_17415	0.57	-0.8
3,847,074	+		AO353_17415	0.57	+0.6
3,847,074	+		AO353_17415	0.57	+1.2
3,847,075	-		AO353_17415	0.58	+0.2
3,847,075	-		AO353_17415	0.58	-0.2
3,847,075	-		AO353_17415	0.58	-0.6
3,847,075	-		AO353_17415	0.58	-0.2
3,847,075	-		AO353_17415	0.58	+0.9
3,847,075	-		AO353_17415	0.58	-1.0
3,847,075	-		AO353_17415	0.58	+0.6
3,847,075	-		AO353_17415	0.58	-1.4
3,847,075	-		AO353_17415	0.58	-0.4
3,847,075	-		AO353_17415	0.58	-0.0
3,847,075	-		AO353_17415	0.58	+1.2
3,847,075	-		AO353_17415	0.58	-0.4
3,847,125	+		AO353_17415	0.72	+0.8
3,847,125	+		AO353_17415	0.72	+0.3
3,847,125	+		AO353_17415	0.72	-0.9
3,847,125	+		AO353_17415	0.72	-1.2
3,847,126	-		AO353_17415	0.72	-0.4
3,847,126	-		AO353_17415	0.72	-1.8
3,847,126	-		AO353_17415	0.72	+1.3
3,847,126	-		AO353_17415	0.72	+0.3
3,847,126	-		AO353_17415	0.72	-1.2
3,847,218	+				-0.1
3,847,219	-				-0.3
3,847,219	-				-0.4
3,847,219	-				-0.3
3,847,219	-				-0.8
3,847,714	+				+2.6
3,847,715	-				+0.7
3,847,715	-				+0.5
3,847,869	+		AO353_17420	0.25	+0.6
3,847,869	+		AO353_17420	0.25	-1.4
3,847,870	-		AO353_17420	0.25	+0.6
3,847,870	-		AO353_17420	0.25	-0.0
3,847,880	-		AO353_17420	0.26	-1.0
3,847,894	+		AO353_17420	0.27	-1.3
3,847,894	+		AO353_17420	0.27	+0.1
3,847,895	-		AO353_17420	0.28	-0.8
3,847,895	-		AO353_17420	0.28	-1.2
3,848,097	-		AO353_17420	0.47	-0.6
3,848,105	+		AO353_17420	0.48	+0.1
3,848,112	-		AO353_17420	0.49	+1.8
3,848,145	+		AO353_17420	0.52	+0.1
3,848,145	+		AO353_17420	0.52	+0.6
3,848,146	-		AO353_17420	0.52	-0.4
3,848,146	-		AO353_17420	0.52	-0.3
3,848,146	-		AO353_17420	0.52	-1.5
3,848,185	+		AO353_17420	0.56	+0.3
3,848,185	+		AO353_17420	0.56	-1.0
3,848,185	+		AO353_17420	0.56	-0.9
3,848,185	+		AO353_17420	0.56	-0.0
3,848,186	-		AO353_17420	0.56	-1.2
3,848,186	-		AO353_17420	0.56	+0.6
3,848,200	+		AO353_17420	0.57	-0.0
3,848,200	+		AO353_17420	0.57	-1.1
3,848,201	-		AO353_17420	0.58	+0.1
3,848,201	-		AO353_17420	0.58	-0.1
3,848,268	+		AO353_17420	0.64	+0.6
3,848,329	+		AO353_17420	0.70	-1.4
3,848,329	+		AO353_17420	0.70	-0.2
3,848,329	+		AO353_17420	0.70	-0.4
3,848,329	+		AO353_17420	0.70	-0.1
3,848,330	-		AO353_17420	0.70	-1.3
3,848,330	-		AO353_17420	0.70	-0.0
3,848,333	-		AO353_17420	0.70	-0.2
3,848,333	-		AO353_17420	0.70	-1.4
3,848,333	-		AO353_17420	0.70	-0.3
3,848,333	-		AO353_17420	0.70	+0.8
3,848,333	-		AO353_17420	0.70	-0.8
3,848,402	+		AO353_17420	0.77	+1.2
3,848,403	-		AO353_17420	0.77	-1.3
3,848,601	+				+0.2
3,848,601	+				-1.9
3,848,601	+				-0.4
3,848,601	+				-0.0
3,848,677	+				-0.9
3,848,678	-				-0.8
3,848,678	-				-0.3
3,848,771	+				-1.0
3,848,870	+				+0.2
3,848,870	+				-0.4
3,848,870	+				-0.3
3,848,871	-				+1.0
3,848,871	-				-0.6
3,848,871	-				-1.1
3,848,871	-				-0.5
3,849,143	+		AO353_17425	0.31	+0.6
3,849,144	-		AO353_17425	0.31	-0.1
3,849,144	-		AO353_17425	0.31	-0.0
3,849,392	+		AO353_17425	0.52	-0.0
3,849,393	-		AO353_17425	0.53	+0.3
3,849,393	-		AO353_17425	0.53	+1.1
3,849,393	-		AO353_17425	0.53	+1.1
3,849,393	-		AO353_17425	0.53	+0.3
3,849,518	+		AO353_17425	0.63	-0.1
3,849,519	-		AO353_17425	0.64	-1.9
3,849,519	-		AO353_17425	0.64	+0.1
3,849,519	-		AO353_17425	0.64	+0.7
3,849,519	-		AO353_17425	0.64	+0.3
3,849,602	+		AO353_17425	0.71	+0.4
3,849,602	+		AO353_17425	0.71	+0.6
3,849,602	+		AO353_17425	0.71	+1.0
3,849,603	-		AO353_17425	0.71	-1.1
3,849,603	-		AO353_17425	0.71	-1.2
3,849,603	-		AO353_17425	0.71	+0.6
3,849,603	-		AO353_17425	0.71	+0.3
3,849,603	-		AO353_17425	0.71	+0.2