Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05885

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
1,307,513	+				+1.0
1,307,523	-				+0.4
1,307,544	+				-0.2
1,307,544	+				-1.4
1,307,544	+				+0.8
1,307,544	+				-0.0
1,307,545	-				-0.9
1,307,545	-				+0.3
1,307,545	-				-0.1
1,307,545	-				-0.2
1,307,553	+				+0.0
1,307,553	+				-1.3
1,307,553	+				+0.4
1,307,554	-				-1.4
1,307,576	-				+2.4
1,307,576	-				+0.4
1,307,584	+				-1.1
1,307,584	+				-0.4
1,307,584	+				-0.1
1,307,585	-				+0.0
1,307,585	-				+0.8
1,307,585	-				-0.0
1,307,585	-				-0.7
1,307,624	+				+0.4
1,307,624	+				-0.3
1,307,624	+				-0.2
1,307,624	+				-1.4
1,307,625	-				-0.7
1,307,625	-				+1.8
1,307,631	-				+1.4
1,307,658	-				-0.6
1,307,821	+		AO353_05875	0.15	+0.5
1,307,821	+		AO353_05875	0.15	-0.7
1,307,822	-		AO353_05875	0.15	+0.4
1,307,822	-		AO353_05875	0.15	+0.6
1,307,923	-		AO353_05875	0.39	+0.9
1,307,954	+		AO353_05875	0.46	-0.3
1,307,954	+		AO353_05875	0.46	+0.3
1,307,955	-		AO353_05875	0.47	-0.5
1,308,014	-		AO353_05875	0.61	-0.3
1,308,014	-		AO353_05875	0.61	-0.4
1,308,014	-		AO353_05875	0.61	+0.4
1,308,014	-		AO353_05875	0.61	-1.2
1,308,122	+		AO353_05875	0.86	+1.1
1,308,122	+		AO353_05875	0.86	-0.5
1,308,122	+		AO353_05875	0.86	-0.7
1,308,122	+		AO353_05875	0.86	-0.8
1,308,122	+		AO353_05875	0.86	-1.6
1,308,122	+		AO353_05875	0.86	+0.0
1,308,122	+		AO353_05875	0.86	+0.3
1,308,122	+		AO353_05875	0.86	-1.0
1,308,122	+		AO353_05875	0.86	+0.8
1,308,122	+		AO353_05875	0.86	+0.1
1,308,122	+		AO353_05875	0.86	-0.0
1,308,122	+		AO353_05875	0.86	-1.6
1,308,122	+		AO353_05875	0.86	+0.2
1,308,122	+		AO353_05875	0.86	-0.2
1,308,122	+		AO353_05875	0.86	+0.3
1,308,122	+		AO353_05875	0.86	+0.2
1,308,122	+		AO353_05875	0.86	+0.6
1,308,122	+		AO353_05875	0.86	-0.8
1,308,122	+		AO353_05875	0.86	-0.0
1,308,122	+		AO353_05875	0.86	-1.6
1,308,122	+		AO353_05875	0.86	+1.6
1,308,123	-		AO353_05875	0.87	+1.4
1,308,123	-		AO353_05875	0.87	-0.9
1,308,123	-		AO353_05875	0.87	+0.3
1,308,123	-		AO353_05875	0.87	-1.9
1,308,123	-		AO353_05875	0.87	-0.5
1,308,123	-		AO353_05875	0.87	-1.0
1,308,123	-		AO353_05875	0.87	+0.1
1,308,123	-		AO353_05875	0.87	-1.5
1,308,123	-		AO353_05875	0.87	-1.6
1,308,123	-		AO353_05875	0.87	+0.9
1,308,123	-		AO353_05875	0.87	+0.4
1,308,123	-		AO353_05875	0.87	-0.9
1,308,123	-		AO353_05875	0.87	+0.6
1,308,173	+				-0.9
1,308,173	+				-1.0
1,308,173	+				+0.7
1,308,174	-				-0.7
1,308,381	+		AO353_05880	0.84	+0.1
1,308,381	+		AO353_05880	0.84	+1.3
1,308,381	+		AO353_05880	0.84	-0.3
1,308,381	+		AO353_05880	0.84	+1.8
1,308,382	-		AO353_05880	0.84	+0.2
1,308,458	+				+2.3
1,308,459	-				-0.0
1,308,476	+				+0.2
1,308,476	+				+2.0
1,308,476	+				-0.8
1,308,476	+				+0.4
1,308,476	+				-0.7
1,308,476	+				+0.8
1,308,476	+				+0.2
1,308,476	+				-0.3
1,308,476	+				+0.1
1,308,477	-				-1.0
1,308,477	-				+0.9
1,308,477	-				-0.1
1,308,477	-				+0.1
1,308,477	-				+0.4
1,308,477	-				+0.3
1,308,486	+				-1.4
1,308,486	+				-1.4
1,308,486	+				-0.6
1,308,486	+				-0.3
1,308,487	-				+1.0
1,308,524	-				+0.3
1,308,524	-				-0.7
1,308,612	+		AO353_05885	0.30	-1.5
1,308,612	+		AO353_05885	0.30	+0.2
1,308,613	-		AO353_05885	0.30	-0.2
1,308,669	-		AO353_05885	0.45	-1.2
1,308,744	+		AO353_05885	0.65	-2.9
1,308,744	+		AO353_05885	0.65	+0.5
1,308,744	+		AO353_05885	0.65	-0.7
1,308,744	+		AO353_05885	0.65	-0.7
1,308,745	-		AO353_05885	0.66	+0.3
1,308,745	-		AO353_05885	0.66	-1.0
1,308,745	-		AO353_05885	0.66	-0.4
1,308,807	+		AO353_05885	0.82	-1.2
1,308,807	+		AO353_05885	0.82	-1.0
1,308,807	+		AO353_05885	0.82	-0.7
1,308,807	+		AO353_05885	0.82	-1.4
1,308,807	+		AO353_05885	0.82	+0.6
1,308,807	+		AO353_05885	0.82	-1.7
1,308,808	-		AO353_05885	0.83	-0.2
1,308,859	+				+0.2
1,308,878	-				-0.4
1,308,903	+				-0.7
1,308,903	+				-0.2
1,308,903	+				-1.9
1,308,903	+				-1.8
1,308,903	+				+0.7
1,308,904	-				-1.5
1,308,904	-				+0.2
1,308,904	-				-0.4
1,308,904	-				+0.4
1,308,904	-				-1.4
1,308,904	-				+0.6
1,308,904	-				-1.6
1,308,994	-				-0.6
1,308,994	-				+0.8
1,309,069	+				+0.0
1,309,071	+				-1.1
1,309,071	+				+2.1
1,309,071	+				+0.3
1,309,071	+				-0.9
1,309,071	+				+1.0
1,309,071	+				-0.4
1,309,071	+				+0.7
1,309,072	-				+0.5
1,309,072	-				+0.2
1,309,072	-				-1.1
1,309,072	-				-0.1
1,309,072	-				+0.2
1,309,072	-				-0.3
1,309,072	-				+1.6
1,309,072	-				-0.6
1,309,072	-				+0.3
1,309,072	-				-0.4
1,309,072	-				+0.1
1,309,072	-				-1.7
1,309,072	-				+0.7
1,309,072	-				+0.1
1,309,072	-				+0.0
1,309,072	-				+0.4
1,309,428	+		AO353_05890	0.30	-0.4
1,309,428	+		AO353_05890	0.30	-0.4
1,309,428	+		AO353_05890	0.30	+0.8
1,309,431	+				+0.2
1,309,431	+		AO353_05890	0.30	-0.6
1,309,431	+		AO353_05890	0.30	-1.0
1,309,431	+		AO353_05890	0.30	+0.3
1,309,431	+		AO353_05890	0.30	-1.2
1,309,432	-		AO353_05890	0.30	+0.2
1,309,432	-		AO353_05890	0.30	+1.4
1,309,432	-		AO353_05890	0.30	+0.4
1,309,432	-		AO353_05890	0.30	-0.1
1,309,432	-		AO353_05890	0.30	+0.5
1,309,432	-		AO353_05890	0.30	-1.2
1,309,432	-		AO353_05890	0.30	+0.4
1,309,608	+		AO353_05890	0.42	+0.7
1,309,609	-		AO353_05890	0.42	-0.1
1,309,609	-		AO353_05890	0.42	+0.2
1,309,615	-		AO353_05890	0.43	-0.9
1,309,812	+		AO353_05890	0.56	-1.4
1,309,812	+		AO353_05890	0.56	-0.9
1,309,812	+		AO353_05890	0.56	-0.1
1,309,812	+		AO353_05890	0.56	-0.7
1,309,812	+		AO353_05890	0.56	-0.2
1,309,813	-		AO353_05890	0.56	+0.3
1,309,813	-		AO353_05890	0.56	-0.0
1,309,813	-		AO353_05890	0.56	+2.1
1,309,813	-		AO353_05890	0.56	-0.2
1,309,864	+		AO353_05890	0.60	-0.6
1,309,864	+		AO353_05890	0.60	+0.1
1,309,864	+		AO353_05890	0.60	+0.7
1,309,865	-		AO353_05890	0.60	-0.6
1,309,865	-		AO353_05890	0.60	+0.4