Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS18075

Experiment: Glucuronamide (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS18070 and ABZR86_RS18075 are separated by 200 nucleotidesABZR86_RS18075 and ABZR86_RS18080 are separated by 7 nucleotides ABZR86_RS18070: ABZR86_RS18070 - META and DUF4377 domain-containing protein, at 30,140 to 30,967 _RS18070 ABZR86_RS18075: ABZR86_RS18075 - alpha/beta hydrolase, at 31,168 to 31,857 _RS18075 ABZR86_RS18080: ABZR86_RS18080 - sulfotransferase, at 31,865 to 32,791 _RS18080 Position (kb) 31 32Strain fitness (log2 ratio) -1 0 1at 30.174 kb on + strandat 30.174 kb on + strandat 30.174 kb on + strandat 30.174 kb on + strandat 30.174 kb on + strandat 30.175 kb on - strandat 30.175 kb on - strandat 30.175 kb on - strandat 30.175 kb on - strandat 30.216 kb on + strandat 30.216 kb on + strandat 30.216 kb on + strandat 30.259 kb on + strand, within ABZR86_RS18070at 30.259 kb on + strand, within ABZR86_RS18070at 30.260 kb on - strand, within ABZR86_RS18070at 30.260 kb on - strand, within ABZR86_RS18070at 30.260 kb on - strand, within ABZR86_RS18070at 30.260 kb on - strand, within ABZR86_RS18070at 30.261 kb on + strand, within ABZR86_RS18070at 30.261 kb on + strand, within ABZR86_RS18070at 30.280 kb on - strand, within ABZR86_RS18070at 30.327 kb on + strand, within ABZR86_RS18070at 30.328 kb on - strand, within ABZR86_RS18070at 30.328 kb on - strand, within ABZR86_RS18070at 30.509 kb on + strand, within ABZR86_RS18070at 30.978 kb on + strandat 31.059 kb on + strandat 31.120 kb on - strandat 31.335 kb on + strand, within ABZR86_RS18075at 31.335 kb on + strand, within ABZR86_RS18075at 31.429 kb on + strand, within ABZR86_RS18075at 31.429 kb on + strand, within ABZR86_RS18075at 31.429 kb on + strand, within ABZR86_RS18075at 31.429 kb on + strand, within ABZR86_RS18075at 31.429 kb on + strand, within ABZR86_RS18075at 31.429 kb on + strand, within ABZR86_RS18075at 31.430 kb on - strand, within ABZR86_RS18075at 31.558 kb on + strand, within ABZR86_RS18075at 31.558 kb on + strand, within ABZR86_RS18075at 31.560 kb on + strand, within ABZR86_RS18075at 31.650 kb on + strand, within ABZR86_RS18075at 31.650 kb on + strand, within ABZR86_RS18075at 31.807 kb on + strandat 31.962 kb on + strand, within ABZR86_RS18080at 31.962 kb on + strand, within ABZR86_RS18080at 31.963 kb on - strand, within ABZR86_RS18080at 31.963 kb on - strand, within ABZR86_RS18080at 32.206 kb on - strand, within ABZR86_RS18080at 32.227 kb on - strand, within ABZR86_RS18080at 32.586 kb on + strand, within ABZR86_RS18080

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Per-strain Table

Position Strand Gene LocusTag Fraction Glucuronamide (N)
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30,174 + +0.6
30,174 + -0.5
30,174 + +0.2
30,174 + +0.1
30,174 + +0.6
30,175 - -0.4
30,175 - +0.1
30,175 - -0.3
30,175 - -0.2
30,216 + -0.2
30,216 + -0.0
30,216 + -0.3
30,259 + ABZR86_RS18070 0.14 +0.3
30,259 + ABZR86_RS18070 0.14 -0.0
30,260 - ABZR86_RS18070 0.14 +0.4
30,260 - ABZR86_RS18070 0.14 +0.3
30,260 - ABZR86_RS18070 0.14 -0.3
30,260 - ABZR86_RS18070 0.14 -0.4
30,261 + ABZR86_RS18070 0.15 +0.3
30,261 + ABZR86_RS18070 0.15 -0.4
30,280 - ABZR86_RS18070 0.17 -0.4
30,327 + ABZR86_RS18070 0.23 -0.0
30,328 - ABZR86_RS18070 0.23 +1.6
30,328 - ABZR86_RS18070 0.23 -0.2
30,509 + ABZR86_RS18070 0.45 -0.6
30,978 + -0.3
31,059 + +0.3
31,120 - +0.2
31,335 + ABZR86_RS18075 0.24 -0.1
31,335 + ABZR86_RS18075 0.24 -0.4
31,429 + ABZR86_RS18075 0.38 +0.3
31,429 + ABZR86_RS18075 0.38 -0.1
31,429 + ABZR86_RS18075 0.38 -0.4
31,429 + ABZR86_RS18075 0.38 +0.6
31,429 + ABZR86_RS18075 0.38 +0.6
31,429 + ABZR86_RS18075 0.38 +0.4
31,430 - ABZR86_RS18075 0.38 -0.3
31,558 + ABZR86_RS18075 0.57 -0.2
31,558 + ABZR86_RS18075 0.57 +0.4
31,560 + ABZR86_RS18075 0.57 +1.0
31,650 + ABZR86_RS18075 0.70 +0.0
31,650 + ABZR86_RS18075 0.70 +0.0
31,807 + -0.5
31,962 + ABZR86_RS18080 0.10 -0.4
31,962 + ABZR86_RS18080 0.10 -1.3
31,963 - ABZR86_RS18080 0.11 -0.9
31,963 - ABZR86_RS18080 0.11 +0.1
32,206 - ABZR86_RS18080 0.37 +0.2
32,227 - ABZR86_RS18080 0.39 -0.2
32,586 + ABZR86_RS18080 0.78 +0.2

Or see this region's nucleotide sequence