Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS11730 and ABZR86_RS11735 are separated by 105 nucleotides ABZR86_RS11735 and ABZR86_RS11740 are separated by 226 nucleotides
ABZR86_RS11730: ABZR86_RS11730 - fumarylacetoacetate hydrolase family protein, at 2,628,609 to 2,629,295
_RS11730
ABZR86_RS11735: ABZR86_RS11735 - large-conductance mechanosensitive channel protein MscL, at 2,629,401 to 2,629,811
_RS11735
ABZR86_RS11740: ABZR86_RS11740 - M20/M25/M40 family metallo-hydrolase, at 2,630,038 to 2,631,480
_RS11740
Position (kb)
2629
2630 Strain fitness (log2 ratio)
-1
0
1 at 2628.491 kb on + strand at 2628.492 kb on - strand at 2628.492 kb on - strand at 2628.492 kb on - strand at 2628.525 kb on + strand at 2628.526 kb on - strand at 2628.551 kb on - strand at 2628.566 kb on + strand at 2628.566 kb on + strand at 2628.566 kb on + strand at 2628.566 kb on + strand at 2628.566 kb on + strand at 2628.566 kb on + strand at 2628.567 kb on - strand at 2628.567 kb on - strand at 2628.589 kb on + strand at 2628.590 kb on - strand at 2628.615 kb on + strand at 2628.615 kb on + strand at 2628.615 kb on + strand at 2628.615 kb on + strand at 2628.615 kb on + strand at 2628.615 kb on + strand at 2628.616 kb on - strand at 2628.616 kb on - strand at 2628.616 kb on - strand at 2628.616 kb on - strand at 2628.616 kb on - strand at 2628.654 kb on + strand at 2628.654 kb on + strand at 2628.654 kb on + strand at 2628.709 kb on - strand, within ABZR86_RS11730 at 2629.291 kb on + strand at 2629.291 kb on + strand at 2629.291 kb on + strand at 2629.292 kb on - strand at 2629.292 kb on - strand at 2629.292 kb on - strand at 2629.293 kb on + strand at 2629.638 kb on + strand, within ABZR86_RS11735 at 2629.809 kb on + strand at 2629.809 kb on + strand at 2629.810 kb on - strand at 2629.831 kb on - strand at 2629.851 kb on + strand at 2629.851 kb on + strand at 2629.852 kb on - strand at 2629.852 kb on - strand at 2629.935 kb on - strand at 2629.942 kb on - strand at 2629.942 kb on - strand at 2629.956 kb on - strand at 2629.956 kb on - strand at 2629.956 kb on - strand at 2629.956 kb on - strand at 2630.055 kb on + strand at 2630.055 kb on + strand at 2630.056 kb on - strand at 2630.056 kb on - strand at 2630.283 kb on - strand, within ABZR86_RS11740 at 2630.308 kb on + strand, within ABZR86_RS11740 at 2630.309 kb on - strand, within ABZR86_RS11740 at 2630.309 kb on - strand, within ABZR86_RS11740 at 2630.309 kb on - strand, within ABZR86_RS11740 at 2630.309 kb on - strand, within ABZR86_RS11740 at 2630.327 kb on - strand, within ABZR86_RS11740 at 2630.407 kb on + strand, within ABZR86_RS11740 at 2630.408 kb on - strand, within ABZR86_RS11740
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 2,628,491 + +0.3 2,628,492 - -0.0 2,628,492 - -0.8 2,628,492 - -0.3 2,628,525 + -0.2 2,628,526 - +0.5 2,628,551 - -0.0 2,628,566 + +0.1 2,628,566 + +0.4 2,628,566 + +0.5 2,628,566 + +0.1 2,628,566 + -0.1 2,628,566 + -0.1 2,628,567 - +0.2 2,628,567 - +0.3 2,628,589 + -0.7 2,628,590 - -0.0 2,628,615 + -0.6 2,628,615 + +0.8 2,628,615 + +0.2 2,628,615 + -0.1 2,628,615 + +0.2 2,628,615 + -0.1 2,628,616 - -0.3 2,628,616 - -0.7 2,628,616 - +0.4 2,628,616 - +0.1 2,628,616 - +0.5 2,628,654 + +0.0 2,628,654 + -0.0 2,628,654 + +0.1 2,628,709 - ABZR86_RS11730 0.15 +0.9 2,629,291 + -0.1 2,629,291 + -1.6 2,629,291 + +0.2 2,629,292 - +1.4 2,629,292 - +0.2 2,629,292 - -0.8 2,629,293 + -0.7 2,629,638 + ABZR86_RS11735 0.58 +0.9 2,629,809 + +0.1 2,629,809 + +0.1 2,629,810 - +0.2 2,629,831 - +0.5 2,629,851 + +0.1 2,629,851 + +0.2 2,629,852 - +0.1 2,629,852 - +0.9 2,629,935 - +1.1 2,629,942 - +0.1 2,629,942 - -0.9 2,629,956 - -0.8 2,629,956 - +0.4 2,629,956 - +0.3 2,629,956 - -0.3 2,630,055 + +1.2 2,630,055 + +0.4 2,630,056 - +0.5 2,630,056 - -0.3 2,630,283 - ABZR86_RS11740 0.17 +0.1 2,630,308 + ABZR86_RS11740 0.19 +0.6 2,630,309 - ABZR86_RS11740 0.19 -0.6 2,630,309 - ABZR86_RS11740 0.19 -0.1 2,630,309 - ABZR86_RS11740 0.19 +0.0 2,630,309 - ABZR86_RS11740 0.19 -0.3 2,630,327 - ABZR86_RS11740 0.20 +0.4 2,630,407 + ABZR86_RS11740 0.26 +0.2 2,630,408 - ABZR86_RS11740 0.26 -0.7
Or see this region's nucleotide sequence