Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS09695 and ABZR86_RS09700 are separated by 254 nucleotides ABZR86_RS09700 and ABZR86_RS09705 are separated by 58 nucleotides ABZR86_RS09705 and ABZR86_RS09710 are separated by 87 nucleotides
ABZR86_RS09695: ABZR86_RS09695 - threonine--tRNA ligase, at 2,158,145 to 2,160,046
_RS09695
ABZR86_RS09700: ABZR86_RS09700 - NAD-dependent epimerase, at 2,160,301 to 2,161,311
_RS09700
ABZR86_RS09705: ABZR86_RS09705 - CopD family protein, at 2,161,370 to 2,161,816
_RS09705
ABZR86_RS09710: ABZR86_RS09710 - flagellar basal body P-ring formation chaperone FlgA, at 2,161,904 to 2,162,647
_RS09710
Position (kb)
2160
2161
2162 Strain fitness (log2 ratio)
-1
0
1
2 at 2160.135 kb on - strand at 2160.135 kb on - strand at 2160.135 kb on - strand at 2160.267 kb on + strand at 2160.292 kb on + strand at 2160.406 kb on + strand, within ABZR86_RS09700 at 2160.406 kb on + strand, within ABZR86_RS09700 at 2160.409 kb on + strand, within ABZR86_RS09700 at 2160.409 kb on + strand, within ABZR86_RS09700 at 2160.409 kb on + strand, within ABZR86_RS09700 at 2160.410 kb on - strand, within ABZR86_RS09700 at 2160.410 kb on - strand, within ABZR86_RS09700 at 2160.410 kb on - strand, within ABZR86_RS09700 at 2160.410 kb on - strand, within ABZR86_RS09700 at 2160.463 kb on + strand, within ABZR86_RS09700 at 2160.464 kb on - strand, within ABZR86_RS09700 at 2160.464 kb on - strand, within ABZR86_RS09700 at 2160.572 kb on - strand, within ABZR86_RS09700 at 2160.595 kb on + strand, within ABZR86_RS09700 at 2160.595 kb on + strand, within ABZR86_RS09700 at 2160.595 kb on + strand, within ABZR86_RS09700 at 2160.595 kb on + strand, within ABZR86_RS09700 at 2160.596 kb on - strand, within ABZR86_RS09700 at 2160.596 kb on - strand, within ABZR86_RS09700 at 2160.596 kb on - strand, within ABZR86_RS09700 at 2160.596 kb on - strand, within ABZR86_RS09700 at 2160.670 kb on + strand, within ABZR86_RS09700 at 2160.670 kb on + strand, within ABZR86_RS09700 at 2160.670 kb on + strand, within ABZR86_RS09700 at 2160.671 kb on - strand, within ABZR86_RS09700 at 2160.671 kb on - strand, within ABZR86_RS09700 at 2160.691 kb on + strand, within ABZR86_RS09700 at 2160.792 kb on + strand, within ABZR86_RS09700 at 2160.793 kb on - strand, within ABZR86_RS09700 at 2160.793 kb on - strand, within ABZR86_RS09700 at 2160.796 kb on + strand, within ABZR86_RS09700 at 2160.796 kb on + strand, within ABZR86_RS09700 at 2160.796 kb on + strand, within ABZR86_RS09700 at 2160.796 kb on + strand, within ABZR86_RS09700 at 2160.796 kb on + strand, within ABZR86_RS09700 at 2160.796 kb on + strand, within ABZR86_RS09700 at 2160.796 kb on + strand, within ABZR86_RS09700 at 2160.796 kb on + strand, within ABZR86_RS09700 at 2160.796 kb on + strand, within ABZR86_RS09700 at 2160.797 kb on - strand, within ABZR86_RS09700 at 2160.797 kb on - strand, within ABZR86_RS09700 at 2160.797 kb on - strand, within ABZR86_RS09700 at 2160.797 kb on - strand, within ABZR86_RS09700 at 2160.797 kb on - strand, within ABZR86_RS09700 at 2160.847 kb on + strand, within ABZR86_RS09700 at 2160.847 kb on + strand, within ABZR86_RS09700 at 2160.848 kb on - strand, within ABZR86_RS09700 at 2160.848 kb on - strand, within ABZR86_RS09700 at 2160.848 kb on - strand, within ABZR86_RS09700 at 2160.848 kb on - strand, within ABZR86_RS09700 at 2160.848 kb on - strand, within ABZR86_RS09700 at 2160.848 kb on - strand, within ABZR86_RS09700 at 2160.958 kb on + strand, within ABZR86_RS09700 at 2160.958 kb on + strand, within ABZR86_RS09700 at 2160.958 kb on + strand, within ABZR86_RS09700 at 2160.958 kb on + strand, within ABZR86_RS09700 at 2160.958 kb on + strand, within ABZR86_RS09700 at 2160.958 kb on + strand, within ABZR86_RS09700 at 2160.958 kb on + strand, within ABZR86_RS09700 at 2160.959 kb on - strand, within ABZR86_RS09700 at 2160.959 kb on - strand, within ABZR86_RS09700 at 2160.959 kb on - strand, within ABZR86_RS09700 at 2160.960 kb on + strand, within ABZR86_RS09700 at 2160.960 kb on + strand, within ABZR86_RS09700 at 2160.961 kb on - strand, within ABZR86_RS09700 at 2160.961 kb on - strand, within ABZR86_RS09700 at 2160.961 kb on - strand, within ABZR86_RS09700 at 2161.075 kb on + strand, within ABZR86_RS09700 at 2161.075 kb on + strand, within ABZR86_RS09700 at 2161.075 kb on + strand, within ABZR86_RS09700 at 2161.075 kb on + strand, within ABZR86_RS09700 at 2161.076 kb on - strand, within ABZR86_RS09700 at 2161.076 kb on - strand, within ABZR86_RS09700 at 2161.294 kb on + strand at 2161.294 kb on + strand at 2161.295 kb on - strand at 2161.323 kb on + strand at 2161.324 kb on - strand at 2161.324 kb on - strand at 2161.324 kb on - strand at 2161.324 kb on - strand at 2161.853 kb on + strand at 2161.853 kb on + strand at 2161.854 kb on - strand at 2161.972 kb on + strand at 2161.972 kb on + strand at 2162.306 kb on - strand, within ABZR86_RS09710
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 2,160,135 - -0.1 2,160,135 - +0.1 2,160,135 - -0.0 2,160,267 + -0.7 2,160,292 + +0.3 2,160,406 + ABZR86_RS09700 0.10 -0.1 2,160,406 + ABZR86_RS09700 0.10 +0.5 2,160,409 + ABZR86_RS09700 0.11 -0.4 2,160,409 + ABZR86_RS09700 0.11 -0.3 2,160,409 + ABZR86_RS09700 0.11 -0.4 2,160,410 - ABZR86_RS09700 0.11 +0.5 2,160,410 - ABZR86_RS09700 0.11 +0.4 2,160,410 - ABZR86_RS09700 0.11 +0.3 2,160,410 - ABZR86_RS09700 0.11 +0.4 2,160,463 + ABZR86_RS09700 0.16 -0.2 2,160,464 - ABZR86_RS09700 0.16 +0.3 2,160,464 - ABZR86_RS09700 0.16 +0.2 2,160,572 - ABZR86_RS09700 0.27 +0.3 2,160,595 + ABZR86_RS09700 0.29 +0.5 2,160,595 + ABZR86_RS09700 0.29 -1.2 2,160,595 + ABZR86_RS09700 0.29 +0.7 2,160,595 + ABZR86_RS09700 0.29 +0.6 2,160,596 - ABZR86_RS09700 0.29 -0.7 2,160,596 - ABZR86_RS09700 0.29 -0.8 2,160,596 - ABZR86_RS09700 0.29 +0.4 2,160,596 - ABZR86_RS09700 0.29 -0.4 2,160,670 + ABZR86_RS09700 0.36 -0.7 2,160,670 + ABZR86_RS09700 0.36 -0.6 2,160,670 + ABZR86_RS09700 0.36 +0.0 2,160,671 - ABZR86_RS09700 0.37 -0.2 2,160,671 - ABZR86_RS09700 0.37 -0.2 2,160,691 + ABZR86_RS09700 0.39 -0.1 2,160,792 + ABZR86_RS09700 0.49 -1.2 2,160,793 - ABZR86_RS09700 0.49 -0.1 2,160,793 - ABZR86_RS09700 0.49 -0.1 2,160,796 + ABZR86_RS09700 0.49 +0.5 2,160,796 + ABZR86_RS09700 0.49 +0.4 2,160,796 + ABZR86_RS09700 0.49 -0.2 2,160,796 + ABZR86_RS09700 0.49 -0.0 2,160,796 + ABZR86_RS09700 0.49 -0.1 2,160,796 + ABZR86_RS09700 0.49 -0.1 2,160,796 + ABZR86_RS09700 0.49 +1.4 2,160,796 + ABZR86_RS09700 0.49 +0.0 2,160,796 + ABZR86_RS09700 0.49 -0.3 2,160,797 - ABZR86_RS09700 0.49 -0.1 2,160,797 - ABZR86_RS09700 0.49 +0.2 2,160,797 - ABZR86_RS09700 0.49 -0.3 2,160,797 - ABZR86_RS09700 0.49 +0.5 2,160,797 - ABZR86_RS09700 0.49 -0.3 2,160,847 + ABZR86_RS09700 0.54 +1.0 2,160,847 + ABZR86_RS09700 0.54 +0.3 2,160,848 - ABZR86_RS09700 0.54 -0.1 2,160,848 - ABZR86_RS09700 0.54 +0.5 2,160,848 - ABZR86_RS09700 0.54 -0.5 2,160,848 - ABZR86_RS09700 0.54 -0.1 2,160,848 - ABZR86_RS09700 0.54 +0.2 2,160,848 - ABZR86_RS09700 0.54 -0.4 2,160,958 + ABZR86_RS09700 0.65 +0.3 2,160,958 + ABZR86_RS09700 0.65 -0.2 2,160,958 + ABZR86_RS09700 0.65 -0.0 2,160,958 + ABZR86_RS09700 0.65 -0.2 2,160,958 + ABZR86_RS09700 0.65 -0.0 2,160,958 + ABZR86_RS09700 0.65 +1.0 2,160,958 + ABZR86_RS09700 0.65 +0.2 2,160,959 - ABZR86_RS09700 0.65 +0.4 2,160,959 - ABZR86_RS09700 0.65 -0.9 2,160,959 - ABZR86_RS09700 0.65 -0.2 2,160,960 + ABZR86_RS09700 0.65 -1.0 2,160,960 + ABZR86_RS09700 0.65 +0.1 2,160,961 - ABZR86_RS09700 0.65 -0.2 2,160,961 - ABZR86_RS09700 0.65 -0.2 2,160,961 - ABZR86_RS09700 0.65 +0.2 2,161,075 + ABZR86_RS09700 0.77 -0.2 2,161,075 + ABZR86_RS09700 0.77 -0.5 2,161,075 + ABZR86_RS09700 0.77 -0.2 2,161,075 + ABZR86_RS09700 0.77 -0.5 2,161,076 - ABZR86_RS09700 0.77 -0.3 2,161,076 - ABZR86_RS09700 0.77 +0.2 2,161,294 + -0.5 2,161,294 + -0.2 2,161,295 - -0.5 2,161,323 + +0.7 2,161,324 - +0.0 2,161,324 - +1.3 2,161,324 - -0.9 2,161,324 - +1.9 2,161,853 + -0.4 2,161,853 + -0.0 2,161,854 - -0.1 2,161,972 + -0.1 2,161,972 + -0.4 2,162,306 - ABZR86_RS09710 0.54 +0.3
Or see this region's nucleotide sequence