Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS01060 and ABZR86_RS01065 are separated by 131 nucleotides ABZR86_RS01065 and ABZR86_RS01070 are separated by 225 nucleotides
ABZR86_RS01060: ABZR86_RS01060 - FecR domain-containing protein, at 208,943 to 210,640
_RS01060
ABZR86_RS01065: ABZR86_RS01065 - ATP-binding protein, at 210,772 to 213,354
_RS01065
ABZR86_RS01070: ABZR86_RS01070 - response regulator transcription factor, at 213,580 to 214,200
_RS01070
Position (kb) 210
211
212
213
214 Strain fitness (log2 ratio) -1
0
1 at 210.031 kb on + strand, within ABZR86_RS01060 at 210.170 kb on + strand, within ABZR86_RS01060 at 210.171 kb on - strand, within ABZR86_RS01060 at 210.171 kb on - strand, within ABZR86_RS01060 at 210.420 kb on + strand, within ABZR86_RS01060 at 210.420 kb on + strand, within ABZR86_RS01060 at 210.420 kb on + strand, within ABZR86_RS01060 at 210.420 kb on + strand, within ABZR86_RS01060 at 210.421 kb on - strand, within ABZR86_RS01060 at 210.421 kb on - strand, within ABZR86_RS01060 at 210.421 kb on - strand, within ABZR86_RS01060 at 210.460 kb on - strand, within ABZR86_RS01060 at 210.505 kb on - strand at 210.594 kb on + strand at 210.594 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.634 kb on - strand at 210.634 kb on - strand at 210.634 kb on - strand at 210.634 kb on - strand at 210.634 kb on - strand at 210.634 kb on - strand at 210.634 kb on - strand at 210.769 kb on + strand at 210.769 kb on + strand at 210.770 kb on - strand at 210.770 kb on - strand at 210.770 kb on - strand at 210.770 kb on - strand at 210.773 kb on + strand at 210.773 kb on + strand at 210.773 kb on + strand at 210.773 kb on + strand at 210.773 kb on + strand at 210.773 kb on + strand at 210.774 kb on - strand at 210.774 kb on - strand at 210.774 kb on - strand at 210.774 kb on - strand at 211.096 kb on - strand, within ABZR86_RS01065 at 211.403 kb on + strand, within ABZR86_RS01065 at 211.404 kb on - strand, within ABZR86_RS01065 at 211.404 kb on - strand, within ABZR86_RS01065 at 212.102 kb on + strand, within ABZR86_RS01065 at 212.191 kb on + strand, within ABZR86_RS01065 at 212.192 kb on - strand, within ABZR86_RS01065 at 212.192 kb on - strand, within ABZR86_RS01065 at 212.317 kb on + strand, within ABZR86_RS01065 at 212.941 kb on + strand, within ABZR86_RS01065 at 212.941 kb on + strand, within ABZR86_RS01065 at 212.941 kb on + strand, within ABZR86_RS01065 at 212.942 kb on - strand, within ABZR86_RS01065 at 212.942 kb on - strand, within ABZR86_RS01065 at 212.942 kb on - strand, within ABZR86_RS01065 at 213.053 kb on - strand, within ABZR86_RS01065 at 213.053 kb on - strand, within ABZR86_RS01065 at 213.053 kb on - strand, within ABZR86_RS01065 at 213.139 kb on - strand at 213.483 kb on + strand at 213.483 kb on + strand at 213.483 kb on + strand at 213.483 kb on + strand at 213.483 kb on + strand at 213.483 kb on + strand at 213.484 kb on - strand at 213.484 kb on - strand at 213.484 kb on - strand at 213.484 kb on - strand at 213.484 kb on - strand at 213.484 kb on - strand at 213.647 kb on - strand, within ABZR86_RS01070 at 213.830 kb on + strand, within ABZR86_RS01070 at 213.830 kb on + strand, within ABZR86_RS01070 at 213.830 kb on + strand, within ABZR86_RS01070 at 213.830 kb on + strand, within ABZR86_RS01070 at 213.830 kb on + strand, within ABZR86_RS01070 at 213.830 kb on + strand, within ABZR86_RS01070 at 213.830 kb on + strand, within ABZR86_RS01070 at 213.961 kb on + strand, within ABZR86_RS01070 at 213.962 kb on - strand, within ABZR86_RS01070 at 214.131 kb on + strand, within ABZR86_RS01070 at 214.132 kb on - strand, within ABZR86_RS01070 at 214.174 kb on + strand at 214.198 kb on + strand at 214.198 kb on + strand at 214.199 kb on - strand at 214.199 kb on - strand at 214.268 kb on + strand at 214.289 kb on + strand at 214.290 kb on - strand at 214.290 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 210,031 + ABZR86_RS01060 0.64 +0.2 210,170 + ABZR86_RS01060 0.72 -0.1 210,171 - ABZR86_RS01060 0.72 +0.4 210,171 - ABZR86_RS01060 0.72 +0.7 210,420 + ABZR86_RS01060 0.87 +0.8 210,420 + ABZR86_RS01060 0.87 -0.5 210,420 + ABZR86_RS01060 0.87 +0.3 210,420 + ABZR86_RS01060 0.87 +0.4 210,421 - ABZR86_RS01060 0.87 +0.8 210,421 - ABZR86_RS01060 0.87 +0.5 210,421 - ABZR86_RS01060 0.87 +0.3 210,460 - ABZR86_RS01060 0.89 -0.7 210,505 - +0.4 210,594 + +0.1 210,594 + -0.1 210,633 + +1.6 210,633 + +0.7 210,633 + +1.1 210,633 + -0.3 210,633 + -0.2 210,633 + -0.5 210,633 + +0.4 210,633 + -0.2 210,633 + -0.5 210,633 + +0.2 210,633 + +0.5 210,634 - -0.6 210,634 - -0.2 210,634 - +0.7 210,634 - +0.1 210,634 - -0.2 210,634 - -0.3 210,634 - -0.1 210,769 + +0.0 210,769 + -0.5 210,770 - -0.5 210,770 - -0.4 210,770 - -0.0 210,770 - -0.4 210,773 + +0.2 210,773 + +0.0 210,773 + -0.5 210,773 + +0.1 210,773 + -0.1 210,773 + -0.4 210,774 - -1.4 210,774 - -0.5 210,774 - -0.4 210,774 - +0.6 211,096 - ABZR86_RS01065 0.13 -0.8 211,403 + ABZR86_RS01065 0.24 -0.1 211,404 - ABZR86_RS01065 0.24 +0.0 211,404 - ABZR86_RS01065 0.24 +0.1 212,102 + ABZR86_RS01065 0.51 -0.4 212,191 + ABZR86_RS01065 0.55 +0.2 212,192 - ABZR86_RS01065 0.55 +0.1 212,192 - ABZR86_RS01065 0.55 +0.2 212,317 + ABZR86_RS01065 0.60 -0.3 212,941 + ABZR86_RS01065 0.84 -0.0 212,941 + ABZR86_RS01065 0.84 +0.7 212,941 + ABZR86_RS01065 0.84 +0.0 212,942 - ABZR86_RS01065 0.84 -0.2 212,942 - ABZR86_RS01065 0.84 +0.0 212,942 - ABZR86_RS01065 0.84 +0.2 213,053 - ABZR86_RS01065 0.88 -0.3 213,053 - ABZR86_RS01065 0.88 +0.3 213,053 - ABZR86_RS01065 0.88 +0.1 213,139 - -0.1 213,483 + -0.4 213,483 + +0.8 213,483 + -0.1 213,483 + -0.2 213,483 + -0.0 213,483 + +0.4 213,484 - +0.4 213,484 - +0.1 213,484 - -0.4 213,484 - -0.4 213,484 - -0.3 213,484 - -0.2 213,647 - ABZR86_RS01070 0.11 +0.2 213,830 + ABZR86_RS01070 0.40 -0.7 213,830 + ABZR86_RS01070 0.40 -1.4 213,830 + ABZR86_RS01070 0.40 -0.4 213,830 + ABZR86_RS01070 0.40 +0.6 213,830 + ABZR86_RS01070 0.40 -0.6 213,830 + ABZR86_RS01070 0.40 +0.3 213,830 + ABZR86_RS01070 0.40 -0.4 213,961 + ABZR86_RS01070 0.61 -1.1 213,962 - ABZR86_RS01070 0.62 +0.2 214,131 + ABZR86_RS01070 0.89 -0.2 214,132 - ABZR86_RS01070 0.89 -0.2 214,174 + -0.3 214,198 + +0.6 214,198 + -0.1 214,199 - +0.2 214,199 - -0.1 214,268 + +0.9 214,289 + -0.2 214,290 - +0.3 214,290 - -0.2
Or see this region's nucleotide sequence