Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00895 and ABZR86_RS00900 are separated by 114 nucleotides ABZR86_RS00900 and ABZR86_RS00905 are separated by 180 nucleotides ABZR86_RS00905 and ABZR86_RS00910 overlap by 4 nucleotides
ABZR86_RS00895: ABZR86_RS00895 - DUF4139 domain-containing protein, at 175,146 to 176,612
_RS00895
ABZR86_RS00900: ABZR86_RS00900 - asparaginase, at 176,727 to 177,740
_RS00900
ABZR86_RS00905: ABZR86_RS00905 - thioesterase family protein, at 177,921 to 178,370
_RS00905
ABZR86_RS00910: ABZR86_RS00910 - excinuclease ABC subunit UvrA, at 178,367 to 181,339
_RS00910
Position (kb) 176
177
178 Strain fitness (log2 ratio) -2
-1
0
1 at 175.771 kb on + strand, within ABZR86_RS00895 at 175.771 kb on + strand, within ABZR86_RS00895 at 175.771 kb on + strand, within ABZR86_RS00895 at 175.771 kb on + strand, within ABZR86_RS00895 at 175.771 kb on + strand, within ABZR86_RS00895 at 175.772 kb on - strand, within ABZR86_RS00895 at 175.772 kb on - strand, within ABZR86_RS00895 at 175.772 kb on - strand, within ABZR86_RS00895 at 176.011 kb on + strand, within ABZR86_RS00895 at 176.011 kb on + strand, within ABZR86_RS00895 at 176.011 kb on + strand, within ABZR86_RS00895 at 176.011 kb on + strand, within ABZR86_RS00895 at 176.011 kb on + strand, within ABZR86_RS00895 at 176.012 kb on - strand, within ABZR86_RS00895 at 176.012 kb on - strand, within ABZR86_RS00895 at 176.012 kb on - strand, within ABZR86_RS00895 at 176.044 kb on + strand, within ABZR86_RS00895 at 176.045 kb on - strand, within ABZR86_RS00895 at 176.144 kb on - strand, within ABZR86_RS00895 at 176.453 kb on - strand, within ABZR86_RS00895 at 176.512 kb on + strand at 176.512 kb on + strand at 176.512 kb on + strand at 176.512 kb on + strand at 176.693 kb on - strand at 176.939 kb on + strand, within ABZR86_RS00900 at 176.939 kb on + strand, within ABZR86_RS00900 at 176.940 kb on - strand, within ABZR86_RS00900 at 176.940 kb on - strand, within ABZR86_RS00900 at 177.044 kb on - strand, within ABZR86_RS00900 at 177.044 kb on - strand, within ABZR86_RS00900 at 177.044 kb on - strand, within ABZR86_RS00900 at 177.197 kb on + strand, within ABZR86_RS00900 at 177.198 kb on - strand, within ABZR86_RS00900 at 177.216 kb on + strand, within ABZR86_RS00900 at 177.217 kb on - strand, within ABZR86_RS00900 at 177.241 kb on + strand, within ABZR86_RS00900 at 177.646 kb on + strand at 177.647 kb on - strand at 177.772 kb on + strand at 177.772 kb on + strand at 177.772 kb on + strand at 177.772 kb on + strand at 177.772 kb on + strand at 177.772 kb on + strand at 177.772 kb on + strand at 177.772 kb on + strand at 177.773 kb on - strand at 177.773 kb on - strand at 178.018 kb on + strand, within ABZR86_RS00905 at 178.018 kb on + strand, within ABZR86_RS00905 at 178.019 kb on - strand, within ABZR86_RS00905 at 178.019 kb on - strand, within ABZR86_RS00905 at 178.138 kb on + strand, within ABZR86_RS00905 at 178.139 kb on - strand, within ABZR86_RS00905 at 178.234 kb on + strand, within ABZR86_RS00905 at 178.234 kb on + strand, within ABZR86_RS00905 at 178.234 kb on + strand, within ABZR86_RS00905 at 178.235 kb on - strand, within ABZR86_RS00905 at 178.243 kb on + strand, within ABZR86_RS00905 at 178.243 kb on + strand, within ABZR86_RS00905 at 178.244 kb on - strand, within ABZR86_RS00905 at 178.244 kb on - strand, within ABZR86_RS00905 at 178.244 kb on - strand, within ABZR86_RS00905 at 178.244 kb on - strand, within ABZR86_RS00905 at 178.690 kb on + strand, within ABZR86_RS00910
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 175,771 + ABZR86_RS00895 0.43 -0.7 175,771 + ABZR86_RS00895 0.43 -0.3 175,771 + ABZR86_RS00895 0.43 -0.0 175,771 + ABZR86_RS00895 0.43 -0.8 175,771 + ABZR86_RS00895 0.43 -1.1 175,772 - ABZR86_RS00895 0.43 +0.0 175,772 - ABZR86_RS00895 0.43 -0.7 175,772 - ABZR86_RS00895 0.43 +0.2 176,011 + ABZR86_RS00895 0.59 +0.5 176,011 + ABZR86_RS00895 0.59 +0.7 176,011 + ABZR86_RS00895 0.59 -0.5 176,011 + ABZR86_RS00895 0.59 -0.0 176,011 + ABZR86_RS00895 0.59 +0.1 176,012 - ABZR86_RS00895 0.59 +0.3 176,012 - ABZR86_RS00895 0.59 +0.6 176,012 - ABZR86_RS00895 0.59 +0.5 176,044 + ABZR86_RS00895 0.61 +0.2 176,045 - ABZR86_RS00895 0.61 -0.6 176,144 - ABZR86_RS00895 0.68 -0.5 176,453 - ABZR86_RS00895 0.89 +0.5 176,512 + -0.4 176,512 + +0.0 176,512 + -0.3 176,512 + +1.0 176,693 - -0.2 176,939 + ABZR86_RS00900 0.21 -2.1 176,939 + ABZR86_RS00900 0.21 -0.9 176,940 - ABZR86_RS00900 0.21 +0.1 176,940 - ABZR86_RS00900 0.21 -0.4 177,044 - ABZR86_RS00900 0.31 -0.5 177,044 - ABZR86_RS00900 0.31 +0.1 177,044 - ABZR86_RS00900 0.31 -0.4 177,197 + ABZR86_RS00900 0.46 +0.1 177,198 - ABZR86_RS00900 0.46 +0.1 177,216 + ABZR86_RS00900 0.48 -0.1 177,217 - ABZR86_RS00900 0.48 +0.1 177,241 + ABZR86_RS00900 0.51 -0.2 177,646 + -0.4 177,647 - +0.5 177,772 + -0.9 177,772 + +0.7 177,772 + -0.1 177,772 + -0.3 177,772 + -0.3 177,772 + -0.4 177,772 + -0.4 177,772 + +0.1 177,773 - +0.8 177,773 - -0.2 178,018 + ABZR86_RS00905 0.22 +0.2 178,018 + ABZR86_RS00905 0.22 +0.6 178,019 - ABZR86_RS00905 0.22 -0.4 178,019 - ABZR86_RS00905 0.22 -0.2 178,138 + ABZR86_RS00905 0.48 +0.2 178,139 - ABZR86_RS00905 0.48 -0.2 178,234 + ABZR86_RS00905 0.70 +0.2 178,234 + ABZR86_RS00905 0.70 +0.8 178,234 + ABZR86_RS00905 0.70 -0.3 178,235 - ABZR86_RS00905 0.70 +0.6 178,243 + ABZR86_RS00905 0.72 +0.4 178,243 + ABZR86_RS00905 0.72 -0.1 178,244 - ABZR86_RS00905 0.72 -0.2 178,244 - ABZR86_RS00905 0.72 -0.4 178,244 - ABZR86_RS00905 0.72 -0.8 178,244 - ABZR86_RS00905 0.72 -0.4 178,690 + ABZR86_RS00910 0.11 -1.3
Or see this region's nucleotide sequence