Strain Fitness in Shewanella loihica PV-4 around Shew_3565

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
4,256,546	-		Shew_3564	0.49	-0.6
4,256,627	+		Shew_3564	0.56	+0.4
4,256,627	+		Shew_3564	0.56	-0.1
4,256,627	+		Shew_3564	0.56	-0.5
4,256,627	+		Shew_3564	0.56	+1.2
4,256,702	+		Shew_3564	0.61	-0.2
4,256,932	+		Shew_3564	0.79	+0.7
4,256,962	-		Shew_3564	0.82	-1.1
4,257,012	+		Shew_3564	0.85	-0.3
4,257,090	+				-0.3
4,257,090	+				-0.1
4,257,098	-				-0.5
4,257,285	+				+0.0
4,257,310	+				+0.6
4,257,397	-				+0.1
4,257,505	-				-1.8
4,257,633	-		Shew_3565	0.12	+0.0
4,257,953	-		Shew_3565	0.22	+0.7
4,258,035	+		Shew_3565	0.25	-0.4
4,258,146	-		Shew_3565	0.28	+0.1
4,258,213	+		Shew_3565	0.30	-0.0
4,258,213	+		Shew_3565	0.30	-2.8
4,258,517	+		Shew_3565	0.40	+0.8
4,258,701	-		Shew_3565	0.46	+1.2
4,258,777	+		Shew_3565	0.48	-0.7
4,258,968	+		Shew_3565	0.55	-0.1
4,259,076	+		Shew_3565	0.58	+0.2
4,259,133	+		Shew_3565	0.60	-0.3
4,259,187	+		Shew_3565	0.62	+0.3
4,259,325	+		Shew_3565	0.66	+0.2
4,259,371	-		Shew_3565	0.68	+2.3
4,259,508	-		Shew_3565	0.72	+0.8
4,259,694	+		Shew_3565	0.78	+0.5
4,259,702	-		Shew_3565	0.78	-0.2
4,259,780	-		Shew_3565	0.81	-0.3
4,259,806	+		Shew_3565	0.82	+0.0
4,259,814	-		Shew_3565	0.82	+0.3
4,260,043	-		Shew_3565	0.89	+0.5
4,260,043	-		Shew_3565	0.89	+0.1
4,260,102	+				+0.3
4,260,123	+				+0.0
4,260,149	-				-0.3
4,260,159	-				-0.3
4,260,445	+				+0.7
4,260,734	-		Shew_3566	0.27	+0.3
4,260,906	-		Shew_3566	0.41	+0.7
4,261,025	-		Shew_3566	0.50	-0.7
4,261,032	+		Shew_3566	0.50	+0.5
4,261,032	+		Shew_3566	0.50	-0.8
4,261,032	+		Shew_3566	0.50	-0.0
4,261,040	-		Shew_3566	0.51	+0.2
4,261,323	-		Shew_3566	0.72	+0.3