Strain Fitness in Shewanella loihica PV-4 around Shew_3560

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
4,249,925	+		Shew_3558	0.43	-0.1
4,249,965	+		Shew_3558	0.52	-0.3
4,250,098	-		Shew_3558	0.80	+0.1
4,250,132	+		Shew_3558	0.88	+0.0
4,250,350	-		Shew_3559	0.18	+0.2
4,250,378	-		Shew_3559	0.23	+0.1
4,250,559	+		Shew_3559	0.56	+1.2
4,250,620	+		Shew_3559	0.68	-0.6
4,250,638	-		Shew_3559	0.71	-0.1
4,250,981	-				+2.9
4,251,034	-		Shew_3560	0.10	+2.2
4,251,067	-		Shew_3560	0.14	+2.4
4,251,130	-		Shew_3560	0.20	+2.3
4,251,130	-		Shew_3560	0.20	+2.3
4,251,190	-		Shew_3560	0.25	+2.4
4,251,555	+		Shew_3560	0.60	+2.4
4,251,573	+		Shew_3560	0.61	+1.7
4,251,837	-		Shew_3560	0.86	+2.1
4,252,017	+				+0.2
4,252,147	+				+2.2
4,252,204	-		Shew_3561	0.13	+2.3
4,252,355	+		Shew_3561	0.24	+2.0
4,252,447	+		Shew_3561	0.30	+2.0
4,252,503	-		Shew_3561	0.34	+2.0
4,252,532	-		Shew_3561	0.36	+2.2
4,252,597	+		Shew_3561	0.41	+2.1
4,252,644	+		Shew_3561	0.44	+2.0
4,252,697	+		Shew_3561	0.48	+2.6