Strain Fitness in Shewanella loihica PV-4 around Shew_3504

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
4,190,466	-		Shew_3503	0.37	-0.6
4,190,515	-		Shew_3503	0.43	+0.9
4,190,515	-		Shew_3503	0.43	+0.0
4,190,824	+		Shew_3503	0.76	-1.3
4,190,824	+		Shew_3503	0.76	-0.4
4,190,832	-		Shew_3503	0.77	-0.2
4,190,832	-		Shew_3503	0.77	-0.9
4,190,880	+		Shew_3503	0.82	+0.2
4,190,948	+		Shew_3503	0.89	-1.3
4,191,198	+				-0.1
4,191,396	+		Shew_3504	0.22	-0.1
4,191,404	-		Shew_3504	0.23	-1.1
4,191,471	-		Shew_3504	0.33	-0.6
4,191,471	-		Shew_3504	0.33	-2.7
4,191,783	+		Shew_3504	0.80	+0.3
4,191,791	-		Shew_3504	0.81	-1.5
4,191,791	-		Shew_3504	0.81	-0.3
4,191,939	+				-0.1
4,191,959	+				+0.2
4,191,959	+				+0.6
4,192,031	+				+0.4
4,192,339	+		Shew_3505	0.30	+0.4
4,192,339	+		Shew_3505	0.30	-0.5
4,192,387	+		Shew_3505	0.34	-0.4
4,192,660	+		Shew_3505	0.59	+0.2
4,192,756	-		Shew_3505	0.68	+0.1
4,192,756	-		Shew_3505	0.68	+0.4
4,192,788	+		Shew_3505	0.71	-0.1
4,192,803	-		Shew_3505	0.72	+0.4
4,192,818	-		Shew_3505	0.73	+0.0