Strain Fitness in Shewanella loihica PV-4 around Shew_3427

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
4,084,499	+		Shew_3426	0.61	+0.4
4,084,666	+		Shew_3426	0.69	-0.3
4,084,677	-		Shew_3426	0.70	+0.3
4,084,735	+		Shew_3426	0.73	+0.2
4,084,921	-		Shew_3426	0.82	-0.1
4,085,194	-				+0.5
4,085,210	+				+0.3
4,085,343	+				-0.1
4,085,597	+				+2.0
4,085,597	+				+3.0
4,085,930	-		Shew_3427	0.23	+2.7
4,086,034	-		Shew_3427	0.27	+3.4
4,086,248	+		Shew_3427	0.37	+2.6
4,086,256	-		Shew_3427	0.37	+2.6
4,086,256	-		Shew_3427	0.37	+2.7
4,086,518	-		Shew_3427	0.49	+2.2
4,086,593	+		Shew_3427	0.53	+2.4
4,086,601	-		Shew_3427	0.53	+2.5
4,086,601	-		Shew_3427	0.53	+4.0
4,086,637	+		Shew_3427	0.55	+2.5
4,086,798	+		Shew_3427	0.62	+2.3
4,086,982	+		Shew_3427	0.70	+3.2
4,087,101	-		Shew_3427	0.75	+2.9
4,087,515	-				+2.6
4,087,556	+				+3.1
4,087,557	+				+2.7
4,087,782	-				+0.4
4,087,911	-				+0.9
4,088,363	+		Shew_3428	0.14	-0.2
4,088,363	+		Shew_3428	0.14	+0.0
4,088,371	-		Shew_3428	0.14	+0.8
4,088,371	-		Shew_3428	0.14	+0.2
4,088,415	+		Shew_3428	0.15	+0.9