Strain Fitness in Shewanella loihica PV-4 around Shew_3279

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
3,923,415	+		Shew_3279	0.31	+0.5
3,923,588	+		Shew_3279	0.39	-0.0
3,923,588	+		Shew_3279	0.39	-0.6
3,923,588	+		Shew_3279	0.39	-0.9
3,923,591	-		Shew_3279	0.39	+1.4
3,923,596	-		Shew_3279	0.39	-0.8
3,923,596	-		Shew_3279	0.39	-0.3
3,923,606	-		Shew_3279	0.39	-0.9
3,923,606	-		Shew_3279	0.39	+0.4
3,923,635	-		Shew_3279	0.41	-0.6
3,923,764	-		Shew_3279	0.47	-0.3
3,923,793	+		Shew_3279	0.48	-0.4
3,923,834	-		Shew_3279	0.50	+0.2
3,923,865	+		Shew_3279	0.51	-0.4
3,923,877	+		Shew_3279	0.52	-0.8
3,923,884	+		Shew_3279	0.52	+0.3
3,924,022	-		Shew_3279	0.58	-0.0
3,924,152	+		Shew_3279	0.64	+0.0
3,924,160	-		Shew_3279	0.64	-0.5
3,924,160	-		Shew_3279	0.64	-0.8
3,924,160	-		Shew_3279	0.64	-0.1
3,924,396	+		Shew_3279	0.75	-0.9
3,925,078	-				+0.2
3,925,151	+		Shew_3280	0.23	+0.1
3,925,159	-		Shew_3280	0.25	+0.3
3,925,229	-		Shew_3280	0.41	-0.1
3,925,302	-		Shew_3280	0.58	-0.5
3,925,365	+		Shew_3280	0.72	+0.5
3,925,458	-				-0.1