Strain Fitness in Shewanella loihica PV-4 around Shew_3222

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
3,844,854	-		Shew_3221	0.27	+5.7
3,844,894	+		Shew_3221	0.30	+5.9
3,845,024	-		Shew_3221	0.42	+5.2
3,845,087	+		Shew_3221	0.47	+0.2
3,845,161	+		Shew_3221	0.53	+1.2
3,845,165	+		Shew_3221	0.54	+0.1
3,845,306	+		Shew_3221	0.66	-0.2
3,845,394	+		Shew_3221	0.73	-0.2
3,845,441	+		Shew_3221	0.77	+0.2
3,845,449	-		Shew_3221	0.78	+4.1
3,845,498	-		Shew_3221	0.82	+4.2
3,846,041	+		Shew_3222	0.43	+0.7
3,846,089	+		Shew_3222	0.51	+1.0
3,846,202	+		Shew_3222	0.70	+0.5
3,846,237	+		Shew_3222	0.75	+1.4
3,846,670	-		Shew_3223	0.14	+0.6
3,847,082	-		Shew_3223	0.69	-0.0
3,847,254	+				-0.2
3,847,275	-				-1.1
3,847,352	+				+0.1