Strain Fitness in Shewanella loihica PV-4 around Shew_3207

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
3,825,274	+		Shew_3206	0.67	-0.8
3,825,477	-		Shew_3206	0.75	-0.1
3,825,577	+		Shew_3206	0.79	+0.3
3,825,788	+		Shew_3206	0.88	-0.1
3,825,788	+		Shew_3206	0.88	-0.0
3,826,027	+				+1.0
3,826,133	+				+0.2
3,826,366	+	napG	Shew_3207	0.30	-0.9
3,826,371	+	napG	Shew_3207	0.30	-0.0
3,826,372	-	napG	Shew_3207	0.30	+0.1
3,826,379	-	napG	Shew_3207	0.31	-2.5
3,826,414	-	napG	Shew_3207	0.36	-0.2
3,826,436	+	napG	Shew_3207	0.39	+0.1
3,826,474	+	napG	Shew_3207	0.44	+0.4
3,826,482	-	napG	Shew_3207	0.45	-0.3
3,826,482	-	napG	Shew_3207	0.45	+1.0
3,826,700	-	napG	Shew_3207	0.75	+0.4
3,826,776	+	napG	Shew_3207	0.86	-0.0
3,826,847	+				-0.2
3,827,151	+	napH	Shew_3208	0.30	-1.3
3,827,398	-	napH	Shew_3208	0.58	+0.2
3,827,503	-	napH	Shew_3208	0.69	-0.1
3,827,505	+	napH	Shew_3208	0.70	-0.5
3,827,538	-	napH	Shew_3208	0.73	-2.4
3,827,615	+	napH	Shew_3208	0.82	-0.2