Strain Fitness in Shewanella loihica PV-4 around Shew_3007

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
3,569,803	-				+0.6
3,569,958	-		Shew_3006	0.32	-0.0
3,570,146	-		Shew_3006	0.65	-0.2
3,570,292	+				+0.9
3,570,300	-				+0.1
3,570,389	-				+0.4
3,570,407	-				-0.3
3,570,614	+				-0.3
3,570,651	+				-0.0
3,570,659	-				+0.5
3,570,659	-				+0.0
3,570,659	-				+0.1
3,570,694	+				-0.0
3,570,802	+		Shew_3007	0.19	+1.2
3,570,810	-		Shew_3007	0.20	+1.5
3,570,862	+		Shew_3007	0.26	+0.1
3,570,947	-		Shew_3007	0.35	-2.2
3,571,345	+		Shew_3007	0.80	+0.5
3,571,604	+				-0.4
3,571,609	+				-2.2
3,571,670	+				-0.3
3,571,921	-		Shew_3008	0.65	+0.0
3,572,032	-				-0.2
3,572,164	-				-0.3
3,572,173	+				-0.0