Strain Fitness in Shewanella loihica PV-4 around Shew_2962

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
3,513,232	-				+0.4
3,513,259	-				-1.1
3,513,289	-				+0.4
3,513,501	+		Shew_2961	0.18	+0.5
3,513,509	-		Shew_2961	0.21	+0.9
3,513,509	-		Shew_2961	0.21	-0.3
3,513,509	-		Shew_2961	0.21	+0.2
3,513,509	-		Shew_2961	0.21	+0.6
3,513,706	+				+0.2
3,514,021	+				-0.3
3,514,302	-		Shew_2962	0.19	-0.3
3,514,877	+		Shew_2962	0.53	-1.8
3,515,101	-		Shew_2962	0.66	-1.0
3,515,101	-		Shew_2962	0.66	-0.8
3,515,120	-		Shew_2962	0.67	+0.4
3,515,431	-		Shew_2962	0.86	+0.4
3,515,503	-		Shew_2962	0.90	-0.3
3,515,817	+				+0.2
3,516,053	+		Shew_2963	0.37	+0.1
3,516,181	-		Shew_2963	0.64	+0.4
3,516,580	-		Shew_2964	0.15	-0.3
3,516,604	+		Shew_2964	0.18	+0.2
3,516,635	-		Shew_2964	0.20	-0.5