Strain Fitness in Shewanella loihica PV-4 around Shew_2954

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
3,500,450	+		Shew_2953	0.49	-0.1
3,500,578	+		Shew_2953	0.57	+1.0
3,500,628	-		Shew_2953	0.60	+0.3
3,500,779	+		Shew_2953	0.69	+1.0
3,500,985	-		Shew_2953	0.82	+0.2
3,501,101	+		Shew_2953	0.90	-0.2
3,501,277	+				-0.3
3,501,953	-		Shew_2954	0.30	-0.2
3,501,996	+		Shew_2954	0.32	+0.1
3,502,224	-		Shew_2954	0.45	+0.8
3,502,854	+		Shew_2954	0.78	+1.2
3,502,947	+		Shew_2954	0.83	+0.1
3,503,035	-		Shew_2954	0.88	+0.7
3,503,039	+		Shew_2954	0.88	+0.6
3,503,067	-		Shew_2954	0.90	+0.0
3,503,131	+				+0.3
3,503,220	-				+0.6
3,503,599	-				-0.0
3,503,700	+		Shew_2955	0.19	-0.2
3,504,033	-		Shew_2955	0.54	-2.4