Strain Fitness in Shewanella loihica PV-4 around Shew_2892

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
3,429,474	-		Shew_2890	0.72	+0.1
3,429,475	-		Shew_2890	0.72	-2.3
3,429,935	+		Shew_2891	0.34	-0.0
3,429,935	+		Shew_2891	0.34	+0.4
3,429,935	+		Shew_2891	0.34	+0.7
3,429,943	-		Shew_2891	0.36	-0.7
3,429,943	-		Shew_2891	0.36	+0.1
3,429,943	-		Shew_2891	0.36	+0.4
3,429,943	-		Shew_2891	0.36	+0.1
3,429,943	-		Shew_2891	0.36	-1.8
3,430,942	-		Shew_2892	0.45	-0.9
3,431,011	+		Shew_2892	0.50	-1.8
3,431,339	+		Shew_2892	0.73	-1.4
3,431,498	-		Shew_2892	0.84	-1.6
3,431,521	-		Shew_2892	0.86	-1.0
3,431,865	+				+0.3
3,431,963	+		Shew_2893	0.27	+0.2
3,432,026	+		Shew_2893	0.40	+0.3
3,432,051	+		Shew_2893	0.45	-1.9
3,432,111	-		Shew_2893	0.57	+0.2
3,432,462	+				+0.6