Strain Fitness in Shewanella loihica PV-4 around Shew_2821

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
3,342,248	+	prfC	Shew_2820	0.78	+0.8
3,342,796	+				+1.2
3,342,796	+				+0.3
3,343,221	-		Shew_2821	0.47	+2.6
3,343,300	-		Shew_2821	0.56	+2.9
3,343,487	+		Shew_2821	0.77	+2.9
3,343,487	+		Shew_2821	0.77	+3.2
3,343,495	-		Shew_2821	0.78	+1.7
3,343,573	+		Shew_2821	0.87	+2.2