Strain Fitness in Shewanella loihica PV-4 around Shew_2788

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
3,296,933	+		Shew_2787	0.27	-0.5
3,296,941	-		Shew_2787	0.28	-0.2
3,296,959	+		Shew_2787	0.30	-0.4
3,297,003	+		Shew_2787	0.34	-0.1
3,297,016	-		Shew_2787	0.36	+0.3
3,297,113	+		Shew_2787	0.45	-0.3
3,297,259	+		Shew_2787	0.60	-0.1
3,297,424	+		Shew_2787	0.76	+0.0
3,297,526	+		Shew_2787	0.87	+0.4
3,297,787	-		Shew_2788	0.11	-1.8
3,297,923	-		Shew_2788	0.27	-0.5
3,298,167	+		Shew_2788	0.56	-0.6
3,298,175	-		Shew_2788	0.57	-0.9
3,298,526	+				+0.6
3,298,651	+				-0.5
3,298,659	-				-0.8
3,298,659	-				+0.4
3,298,873	-		Shew_2789	0.34	+0.2
3,298,999	+		Shew_2789	0.52	+0.1
3,299,107	-		Shew_2789	0.67	+0.1
3,299,144	+		Shew_2789	0.72	+1.0
3,299,207	-		Shew_2789	0.80	-2.2
3,299,222	+		Shew_2789	0.83	+0.3
3,299,222	+		Shew_2789	0.83	+2.0
3,299,230	-		Shew_2789	0.84	+0.1
3,299,230	-		Shew_2789	0.84	+0.6