Strain Fitness in Shewanella loihica PV-4 around Shew_2763
Experiment: Carbenicillin 50 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbenicillin 50 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,267,402 | + | Shew_2761 | 0.59 | +0.4 | |
3,267,567 | - | Shew_2761 | 0.74 | -0.0 | |
3,267,709 | - | Shew_2761 | 0.87 | +0.4 | |
3,267,900 | - | -1.1 | |||
3,268,332 | - | +0.1 | |||
3,268,392 | - | Shew_2763 | 0.10 | -0.7 | |
3,268,671 | + | Shew_2763 | 0.49 | -1.6 | |
3,268,938 | + | Shew_2763 | 0.86 | -0.3 | |
3,269,551 | + | Shew_2764 | 0.49 | -0.1 | |
3,269,551 | + | Shew_2764 | 0.49 | +0.9 |
Or see this region's nucleotide sequence