Strain Fitness in Shewanella loihica PV-4 around Shew_2270

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
2,649,185	+		Shew_2269	0.28	+0.3
2,649,193	-		Shew_2269	0.29	-0.4
2,649,260	-		Shew_2269	0.39	-1.0
2,649,278	+		Shew_2269	0.42	+0.6
2,649,513	+		Shew_2269	0.78	-0.6
2,649,842	-				+1.2
2,650,043	-		Shew_2270	0.16	+1.0
2,650,266	-		Shew_2270	0.33	+0.8
2,650,384	+		Shew_2270	0.42	-0.2
2,650,601	-		Shew_2270	0.59	+0.8
2,650,753	-		Shew_2270	0.71	+0.3
2,650,753	-		Shew_2270	0.71	+0.4
2,650,758	-		Shew_2270	0.71	+1.9
2,650,825	-		Shew_2270	0.77	-0.1
2,651,275	+				+0.4
2,651,472	-				-0.1
2,651,489	+				-0.1
2,651,613	-				+0.3
2,651,613	-				-0.9
2,651,876	+				-1.3
2,651,884	-				+0.4
2,652,034	+				+1.6
2,652,034	+				+0.5
2,652,034	+				-1.3
2,652,034	+				-0.4
2,652,034	+				+0.4
2,652,034	+				+0.0
2,652,042	-				-0.1
2,652,042	-				-0.4
2,652,042	-				-0.1
2,652,042	-				-0.4
2,652,042	-				+0.3
2,652,042	-				+0.1
2,652,042	-				+0.1
2,652,061	-				+0.3
2,652,061	-				-3.5
2,652,061	-				+0.8
2,652,061	-				+0.4
2,652,061	-				+0.2