Strain Fitness in Shewanella loihica PV-4 around Shew_1941

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
2,240,566	+	ansA	Shew_1940	0.89	+1.0
2,240,871	-				+1.2
2,241,031	-		Shew_1941	0.12	+1.7
2,241,098	-		Shew_1941	0.16	+1.6
2,241,585	+		Shew_1941	0.42	+2.3
2,241,732	+		Shew_1941	0.50	+1.3
2,241,732	+		Shew_1941	0.50	+1.3
2,241,732	+		Shew_1941	0.50	+1.3
2,241,902	-		Shew_1941	0.60	+2.3
2,242,256	+		Shew_1941	0.79	+0.9
2,242,476	-				+2.2
2,243,024	-		Shew_1942	0.11	+0.5