Strain Fitness in Shewanella loihica PV-4 around Shew_1898

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
2,191,187	+		Shew_1897	0.28	-0.0
2,191,534	-		Shew_1897	0.55	-0.6
2,191,576	-		Shew_1897	0.58	+1.4
2,191,905	-		Shew_1897	0.83	+0.7
2,191,938	+		Shew_1897	0.85	-1.0
2,192,435	-		Shew_1898	0.28	-1.3
2,192,656	-		Shew_1898	0.50	+0.9
2,192,752	+		Shew_1898	0.60	+1.6
2,193,279	+				+0.2
2,193,558	+				-0.2
2,193,568	+				-0.0
2,193,613	-				+1.7
2,193,665	+				+0.9
2,193,692	+				+0.9
2,193,700	-				-0.6
2,193,759	-				-0.9
2,193,833	+				+0.1
2,193,852	-				+0.9
2,193,856	+				+0.2
2,193,864	-				-0.1