Strain Fitness in Shewanella loihica PV-4 around Shew_1852
Experiment: Carbenicillin 50 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbenicillin 50 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,128,571 | - | Shew_1851 | 0.38 | -0.1 | |
2,130,693 | + | Shew_1852 | 0.47 | +0.2 | |
2,130,741 | + | Shew_1852 | 0.48 | -1.5 | |
2,130,840 | + | Shew_1852 | 0.51 | -0.3 | |
2,131,350 | - | Shew_1852 | 0.68 | -0.7 | |
2,132,146 | + | -0.7 | |||
2,132,575 | - | +0.1 | |||
2,133,239 | + | -0.5 |
Or see this region's nucleotide sequence