Strain Fitness in Shewanella loihica PV-4 around Shew_1275

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
1,473,305	+				+0.3
1,473,327	+				-1.2
1,473,335	-				+0.3
1,473,402	+				-0.5
1,473,410	-				+0.5
1,474,224	-				+1.6
1,474,551	-		Shew_1275	0.17	+0.6
1,474,997	+		Shew_1275	0.44	-0.0
1,475,005	-		Shew_1275	0.45	-3.3
1,475,063	+		Shew_1275	0.48	-0.6
1,475,106	-		Shew_1275	0.51	-0.1
1,475,144	-		Shew_1275	0.53	+0.5
1,475,678	+		Shew_1275	0.86	+0.1
1,475,880	-				+0.5
1,476,052	+				+0.1
1,476,134	+		Shew_1276	0.11	-0.6
1,476,386	-		Shew_1276	0.29	+0.4
1,476,431	-		Shew_1276	0.33	+1.0