Strain Fitness in Shewanella loihica PV-4 around Shew_1174

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
1,355,972	+		Shew_1172	0.85	-0.8
1,355,972	+		Shew_1172	0.85	+0.1
1,356,187	+				-0.2
1,356,210	-				-0.0
1,356,211	+				-0.5
1,356,220	-				+1.8
1,356,278	-				-0.2
1,356,294	-				+0.4
1,356,600	+		Shew_1173	0.72	+0.3
1,356,608	-		Shew_1173	0.73	-1.5
1,356,629	+		Shew_1173	0.78	-0.3
1,356,756	+				-1.2
1,356,927	-				+0.2
1,357,096	+		Shew_1174	0.11	+0.3
1,357,936	+		Shew_1174	0.63	-0.1
1,357,944	-		Shew_1174	0.64	+1.2
1,358,014	-		Shew_1174	0.68	+1.4
1,358,014	-		Shew_1174	0.68	+0.2
1,358,064	+		Shew_1174	0.71	+0.4
1,358,064	+		Shew_1174	0.71	+0.1
1,358,293	+		Shew_1174	0.86	-0.1
1,358,316	+		Shew_1174	0.87	+0.3
1,358,543	-				-0.9
1,358,766	+				+0.0
1,358,910	-		Shew_1175	0.19	-0.2
1,359,062	-		Shew_1175	0.32	-0.2
1,359,162	+		Shew_1175	0.41	+0.2
1,359,170	-		Shew_1175	0.41	-0.4
1,359,277	-		Shew_1175	0.51	-0.2
1,359,474	+		Shew_1175	0.68	-0.1