Strain Fitness in Shewanella loihica PV-4 around Shew_0885

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
1,004,849	+		Shew_0883	0.79	-1.1
1,004,905	+		Shew_0883	0.85	-1.2
1,004,933	-		Shew_0883	0.87	+1.0
1,005,170	+		Shew_0884	0.14	-1.7
1,005,176	-		Shew_0884	0.15	-2.4
1,005,354	-		Shew_0884	0.39	-1.9
1,005,378	-		Shew_0884	0.42	-1.2
1,005,426	+		Shew_0884	0.49	-0.9
1,005,498	+		Shew_0884	0.58	-1.1
1,005,506	-		Shew_0884	0.59	-1.7
1,005,506	-		Shew_0884	0.59	-1.3
1,005,774	-				-0.2
1,005,793	-				+0.0
1,006,317	+	djlA	Shew_0885	0.66	+1.1
1,006,546	+				-0.6
1,006,554	-				-0.2
1,006,564	-				+0.2
1,006,564	-				-0.9
1,006,619	+				+0.7
1,006,684	-		Shew_0886	0.12	+0.8
1,006,752	+		Shew_0886	0.23	+0.2
1,006,843	+		Shew_0886	0.37	-0.9
1,007,149	-		Shew_0886	0.86	-0.3
1,007,154	-		Shew_0886	0.87	-0.0
1,007,376	-		Shew_0887	0.12	+0.1
1,007,386	-		Shew_0887	0.14	+0.7
1,007,496	+		Shew_0887	0.25	+0.9
1,007,504	-		Shew_0887	0.26	-0.3
1,007,504	-		Shew_0887	0.26	+0.8