Strain Fitness in Shewanella loihica PV-4 around Shew_0493

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
549,307	+		Shew_0492	0.48	-0.1
549,469	+		Shew_0492	0.58	-0.1
549,510	+		Shew_0492	0.61	-1.0
549,863	-		Shew_0492	0.83	+0.1
549,863	-		Shew_0492	0.83	+0.4
549,959	+		Shew_0492	0.89	+1.0
549,967	-		Shew_0492	0.89	-1.1
550,217	-				+0.3
550,224	+				+0.4
550,268	-				+0.3
550,616	+		Shew_0493	0.63	-2.7
550,616	+		Shew_0493	0.63	-1.4
550,917	+				+0.6
551,301	+		Shew_0494	0.34	-0.3
551,302	+		Shew_0494	0.34	+0.5
551,505	+		Shew_0494	0.61	+0.1
551,722	+		Shew_0494	0.90	+0.5
551,722	+		Shew_0494	0.90	+0.0