Strain Fitness in Shewanella loihica PV-4 around Shew_0110

Experiment: Carbenicillin 50 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 50 mg/ml
119,759	-		Shew_0109	0.13	-0.4
119,785	+		Shew_0109	0.16	+0.4
119,793	-		Shew_0109	0.17	+0.1
119,793	-		Shew_0109	0.17	-1.1
119,907	-		Shew_0109	0.28	-0.6
120,308	+		Shew_0109	0.66	+0.1
120,518	+		Shew_0109	0.86	-0.4
120,523	+		Shew_0109	0.86	+0.5
120,531	-		Shew_0109	0.87	+0.2
120,868	+		Shew_0110	0.20	-0.8
120,868	+		Shew_0110	0.20	-0.2
120,886	+		Shew_0110	0.22	-0.2
120,962	+		Shew_0110	0.31	-0.6
121,093	-		Shew_0110	0.46	+0.3
121,099	-		Shew_0110	0.47	+0.2
121,184	+		Shew_0110	0.57	-0.5
121,192	-		Shew_0110	0.57	-0.5
121,230	+		Shew_0110	0.62	+0.1
121,230	+		Shew_0110	0.62	+0.2
121,296	-		Shew_0110	0.69	-2.6
121,548	+				+0.2
121,556	-				-0.1
121,907	+		Shew_0111	0.11	+0.1
121,997	-		Shew_0111	0.14	+0.3
122,057	+		Shew_0111	0.16	-0.3
122,067	+		Shew_0111	0.17	-0.2
122,073	+		Shew_0111	0.17	-1.1
122,200	-		Shew_0111	0.22	+0.1
122,243	+		Shew_0111	0.24	+0.2
122,279	+		Shew_0111	0.25	-0.1
122,287	-		Shew_0111	0.25	+0.0
122,423	+		Shew_0111	0.30	+0.3
122,431	-		Shew_0111	0.31	+0.7
122,502	+		Shew_0111	0.33	+1.0