Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4370
Experiment: BHIS with Fusidic 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | BHIS with Fusidic 0.002 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,762,260 | + | -1.0 | |||
5,762,261 | - | -1.9 | |||
5,762,265 | + | -0.8 | |||
5,762,395 | - | BT4370 | 0.10 | -1.3 | |
5,762,460 | - | BT4370 | 0.15 | -1.0 | |
5,762,665 | - | BT4370 | 0.32 | -0.0 | |
5,762,672 | - | BT4370 | 0.32 | -2.7 | |
5,762,808 | + | BT4370 | 0.43 | -2.5 | |
5,762,889 | - | BT4370 | 0.50 | -2.5 | |
5,763,243 | + | BT4370 | 0.78 | +0.3 | |
5,763,520 | + | -0.7 | |||
5,763,563 | + | -2.5 | |||
5,763,618 | + | +1.8 |
Or see this region's nucleotide sequence