Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3681

Experiment: BHIS with Fusidic 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.002 mg/ml
4,782,294	+		BT3680	0.73	+0.5
4,782,295	-		BT3680	0.73	-0.6
4,782,299	+		BT3680	0.73	-2.6
4,782,300	-		BT3680	0.73	+0.8
4,782,305	-		BT3680	0.73	-0.8
4,782,306	+		BT3680	0.73	-1.3
4,782,306	+		BT3680	0.73	-1.3
4,782,307	-		BT3680	0.73	+0.0
4,782,307	-		BT3680	0.73	-3.5
4,782,336	+		BT3680	0.74	-1.0
4,782,433	+		BT3680	0.77	-0.6
4,782,468	-		BT3680	0.78	-1.1
4,782,520	-		BT3680	0.80	-1.8
4,782,576	+		BT3680	0.82	+0.0
4,782,590	+		BT3680	0.82	+0.3
4,782,611	+		BT3680	0.83	-0.4
4,782,650	-		BT3680	0.84	-2.6
4,782,669	+		BT3680	0.85	+1.6
4,782,724	+		BT3680	0.86	-0.4
4,782,853	-				+0.0
4,782,889	-				+0.4
4,783,035	-				+0.6
4,783,047	+				-0.4
4,783,115	-				+0.9
4,783,122	-				-0.8
4,783,153	-				-1.0
4,783,173	+				-3.1
4,783,207	-				-0.4
4,783,261	-				-0.2
4,783,318	+				-2.6
4,783,320	+				+1.0
4,783,323	+				-0.8
4,783,340	-				+1.9
4,783,341	+				-1.2
4,783,341	+				-1.1
4,783,342	-				+0.5
4,783,342	-				-2.1
4,783,471	+		BT3681	0.14	-0.4
4,783,483	+		BT3681	0.14	-1.5
4,783,484	-		BT3681	0.14	-3.5
4,783,489	-		BT3681	0.15	+0.9
4,783,489	-		BT3681	0.15	-1.8
4,783,492	+		BT3681	0.15	-1.0
4,783,504	+		BT3681	0.16	-0.9
4,783,519	-		BT3681	0.16	-2.3
4,783,622	-		BT3681	0.21	-1.4
4,783,624	+		BT3681	0.22	+0.6
4,783,723	+		BT3681	0.27	-0.9
4,783,854	+		BT3681	0.33	-0.4
4,783,855	-		BT3681	0.33	-2.1
4,783,861	+		BT3681	0.34	-2.0
4,783,861	+		BT3681	0.34	-0.8
4,783,862	-		BT3681	0.34	-1.3
4,783,879	+		BT3681	0.34	-1.8
4,783,938	-		BT3681	0.37	-1.7
4,783,991	-		BT3681	0.40	-0.5
4,783,991	-		BT3681	0.40	-0.1
4,784,021	-		BT3681	0.42	+0.5
4,784,062	-		BT3681	0.44	-1.2
4,784,096	-		BT3681	0.45	-3.0
4,784,419	-		BT3681	0.62	-1.0
4,784,446	+		BT3681	0.63	-0.7
4,784,447	-		BT3681	0.63	-1.3
4,784,537	+		BT3681	0.68	-0.8
4,784,539	-		BT3681	0.68	-2.9
4,784,547	+		BT3681	0.68	-1.3
4,784,616	+		BT3681	0.72	-2.0
4,784,616	+		BT3681	0.72	-2.8
4,784,629	+		BT3681	0.72	+1.0
4,784,630	-		BT3681	0.73	-1.1
4,784,630	-		BT3681	0.73	-1.1
4,784,662	-		BT3681	0.74	-0.2
4,784,716	+		BT3681	0.77	+1.6
4,784,749	+		BT3681	0.79	-3.1
4,784,750	-		BT3681	0.79	-3.6
4,784,751	+		BT3681	0.79	+0.9
4,784,793	+		BT3681	0.81	+0.0
4,784,793	+		BT3681	0.81	+0.0
4,784,793	+		BT3681	0.81	-2.5
4,784,857	-		BT3681	0.84	-0.2
4,784,884	-		BT3681	0.85	-2.5
4,784,984	-				-0.7
4,784,984	-				-1.6
4,785,100	+				-1.8
4,785,100	+				-1.6
4,785,101	-				-2.1
4,785,101	-				-1.1
4,785,107	-				-1.6
4,785,111	+				-1.6
4,785,113	+				-0.7
4,785,113	+				+1.6
4,785,114	-				+0.3
4,785,117	+				+0.9
4,785,117	+				+1.6
4,785,118	-				+0.6
4,785,170	-				-1.0
4,785,175	+				+0.0
4,785,178	-				+1.0
4,785,214	+				-1.8
4,785,253	-				+0.0
4,785,256	-				-0.7
4,785,306	-		BT3682	0.13	+2.0
4,785,306	-		BT3682	0.13	-1.8
4,785,455	-		BT3682	0.30	-2.3
4,785,463	-		BT3682	0.30	-2.2
4,785,485	+		BT3682	0.33	-0.7
4,785,557	+		BT3682	0.41	-1.6
4,785,560	-		BT3682	0.41	+0.0
4,785,560	-		BT3682	0.41	+0.6
4,785,562	-		BT3682	0.42	-1.8
4,785,664	-		BT3682	0.53	+0.0
4,785,664	-		BT3682	0.53	+0.8
4,785,670	-		BT3682	0.54	+0.1
4,785,718	+		BT3682	0.59	-0.4
4,785,729	-		BT3682	0.60	-0.4
4,785,740	-		BT3682	0.62	-1.8
4,785,741	+		BT3682	0.62	+0.8
4,785,741	+		BT3682	0.62	+1.6
4,785,786	+		BT3682	0.67	-2.8
4,785,795	+		BT3682	0.68	-2.3
4,785,796	-		BT3682	0.68	-2.4
4,785,943	-		BT3682	0.84	+0.6
4,786,104	-				+0.8
4,786,106	+				-0.8
4,786,107	-				+0.0
4,786,153	+				-0.8