Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2609

Experiment: BHIS with Fusidic 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.002 mg/ml
3,248,354	-		BT2607	0.26	+0.2
3,248,405	-		BT2607	0.34	+0.2
3,248,412	-		BT2607	0.35	-1.4
3,248,444	+		BT2607	0.40	-1.2
3,248,475	+		BT2607	0.44	+0.9
3,248,536	+		BT2607	0.53	-1.4
3,248,537	-		BT2607	0.53	+0.9
3,248,576	+		BT2607	0.59	+0.8
3,248,612	-		BT2607	0.64	-0.9
3,248,612	-		BT2607	0.64	+0.5
3,248,613	+		BT2607	0.65	+3.2
3,248,613	+		BT2607	0.65	+1.6
3,248,790	-				-0.8
3,248,794	+				+4.0
3,248,795	-				-2.0
3,248,796	+				-0.3
3,248,797	-				-0.2
3,248,797	-				+0.0
3,248,798	+				-0.2
3,248,798	+				-1.5
3,248,801	+				-0.6
3,248,802	-				+0.8
3,248,803	+				+2.0
3,248,835	+				-1.8
3,248,840	+				+0.6
3,248,896	+		BT2608	0.12	+0.6
3,248,897	-		BT2608	0.12	-2.3
3,248,907	-		BT2608	0.15	-2.3
3,248,929	+		BT2608	0.19	-1.5
3,248,998	-		BT2608	0.34	-0.3
3,248,999	+		BT2608	0.34	+0.0
3,249,013	+		BT2608	0.37	+0.1
3,249,013	+		BT2608	0.37	+0.7
3,249,014	-		BT2608	0.38	-2.3
3,249,014	-		BT2608	0.38	-0.4
3,249,016	-		BT2608	0.38	+0.6
3,249,017	+		BT2608	0.38	-1.4
3,249,017	+		BT2608	0.38	-1.2
3,249,017	+		BT2608	0.38	+0.4
3,249,017	+		BT2608	0.38	+0.0
3,249,018	-		BT2608	0.38	-1.0
3,249,018	-		BT2608	0.38	-1.1
3,249,084	-		BT2608	0.53	-3.9
3,249,229	-		BT2608	0.84	-0.8
3,249,272	+				-1.4
3,249,272	+				+2.6
3,249,297	+				+0.5
3,249,323	-				+0.5
3,249,406	+				+1.6
3,249,435	+		BT2609	0.16	+0.7
3,249,462	+		BT2609	0.20	-2.7
3,249,504	-		BT2609	0.26	+1.2
3,249,512	+		BT2609	0.27	+0.9
3,249,512	+		BT2609	0.27	+0.6
3,249,513	-		BT2609	0.27	-1.0
3,249,543	+		BT2609	0.31	-0.0
3,249,555	+		BT2609	0.32	+1.6
3,249,556	-		BT2609	0.32	-1.0
3,249,556	-		BT2609	0.32	+0.8
3,249,709	-		BT2609	0.53	-2.0
3,249,747	-		BT2609	0.58	-1.1
3,249,768	+		BT2609	0.60	+0.9
3,249,776	+		BT2609	0.61	-1.2
3,249,936	-		BT2609	0.82	+0.8
3,250,068	+				-0.7
3,250,089	+				-0.5
3,250,121	-				-1.0
3,250,121	-				-3.1
3,250,143	-				-0.6
3,250,146	-				-0.1
3,250,147	+				-2.1
3,250,161	+				+1.6
3,250,171	+				+0.6
3,250,177	+				-2.2
3,250,185	+				-0.2
3,250,185	+				+0.5
3,250,350	+		BT2610	0.46	+1.6
3,250,350	+		BT2610	0.46	+0.1
3,250,350	+		BT2610	0.46	-0.2
3,250,362	+		BT2610	0.48	-2.9
3,250,364	+		BT2610	0.49	-1.5
3,250,399	+		BT2610	0.57	-0.8
3,250,476	+		BT2610	0.75	-2.3
3,250,476	+		BT2610	0.75	+1.3
3,250,570	+				+2.4
3,250,575	+				+0.5
3,250,575	+				-2.7
3,250,575	+				-0.7
3,250,575	+				+0.2
3,250,579	+				+0.0
3,250,811	-		BT2611	0.53	-0.1
3,250,903	-				-2.9
3,250,903	-				-1.8