Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1066

Experiment: BHIS with Fusidic 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.002 mg/ml
1,352,905	-		BT1064	0.66	+0.9
1,352,934	-		BT1064	0.68	-0.9
1,353,054	+		BT1064	0.79	+0.1
1,353,118	+		BT1064	0.84	-0.9
1,353,119	-		BT1064	0.84	+2.3
1,353,126	+		BT1064	0.85	-0.4
1,353,131	+		BT1064	0.85	-0.9
1,353,132	-		BT1064	0.85	-0.9
1,353,250	-				-2.7
1,353,253	+				+1.9
1,353,253	+				+1.4
1,353,253	+				-2.8
1,353,321	+				+0.7
1,353,372	-		BT1065	0.24	-0.9
1,353,416	+		BT1065	0.36	-1.9
1,353,416	+		BT1065	0.36	-0.9
1,353,504	-		BT1065	0.60	-1.9
1,353,542	-		BT1065	0.71	-2.0
1,353,549	+		BT1065	0.72	-2.0
1,353,560	+		BT1065	0.75	+0.8
1,353,651	+				+0.3
1,353,657	-				-1.0
1,353,673	+				+0.0
1,353,709	+				-0.1
1,353,766	+		BT1066	0.19	-1.6
1,353,773	+		BT1066	0.20	+0.4
1,353,792	+		BT1066	0.23	-2.0
1,353,859	+		BT1066	0.35	-0.6
1,353,890	+		BT1066	0.40	-0.7
1,353,943	+		BT1066	0.50	-1.6
1,353,969	-		BT1066	0.54	-1.6
1,354,060	+		BT1066	0.70	-2.3
1,354,124	+		BT1066	0.81	+1.4
1,354,140	+		BT1066	0.84	+0.5
1,354,140	+		BT1066	0.84	-2.8
1,354,212	+				-1.4
1,354,302	+				+0.1
1,354,373	+				-0.9
1,354,387	+				+0.5
1,354,388	-				-1.7
1,354,388	-				+0.4
1,354,477	+		BT1067	0.13	+1.4
1,354,603	+		BT1067	0.20	-1.1
1,354,640	+		BT1067	0.22	+1.4
1,354,643	-		BT1067	0.22	-1.9
1,354,645	-		BT1067	0.22	-1.9
1,354,692	+		BT1067	0.25	-1.4
1,354,754	+		BT1067	0.28	-1.9
1,354,813	+		BT1067	0.31	-0.1
1,354,951	+		BT1067	0.39	+1.1
1,354,987	+		BT1067	0.41	+2.2
1,354,987	+		BT1067	0.41	+0.4
1,355,049	+		BT1067	0.44	+0.2
1,355,110	+		BT1067	0.47	+0.7
1,355,113	-		BT1067	0.48	-0.7
1,355,130	-		BT1067	0.48	-2.5
1,355,151	+		BT1067	0.50	+0.1
1,355,191	+		BT1067	0.52	-2.3
1,355,221	+		BT1067	0.53	-0.9
1,355,223	+		BT1067	0.54	-1.9