Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0126

Experiment: BHIS with Fusidic 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.002 mg/ml
116,488	+		BT0125	0.79	-2.7
116,492	+		BT0125	0.79	-1.6
116,580	+		BT0125	0.84	+0.4
116,650	+		BT0125	0.88	-0.0
116,650	+		BT0125	0.88	+0.1
116,855	-				-0.0
116,872	-				-1.2
116,886	+				-1.1
116,887	-				-2.2
116,890	+				-0.7
116,890	+				-1.0
117,046	+				-2.0
117,091	+				+0.2
117,105	+				+0.8
117,164	-				-2.7
117,309	+				-0.2
117,310	-				+0.4
117,310	-				-0.1
117,336	+				-2.3
117,667	-				+1.4
117,671	-				-1.6
117,671	-				-2.0
117,679	+				-1.5
117,749	+		BT0126	0.10	+1.4
118,082	+		BT0126	0.22	-0.0
118,082	+		BT0126	0.22	-1.1
118,082	+		BT0126	0.22	+0.3
118,083	-		BT0126	0.22	-0.3
118,083	-		BT0126	0.22	-0.3
118,085	-		BT0126	0.22	-2.5
118,085	-		BT0126	0.22	-0.2
118,208	+		BT0126	0.27	-0.9
118,226	+		BT0126	0.28	-1.4
118,347	-		BT0126	0.32	-2.4
118,349	-		BT0126	0.32	-0.9
118,379	-		BT0126	0.33	+1.4
118,413	-		BT0126	0.34	-2.6
118,429	+		BT0126	0.35	+1.8
118,533	+		BT0126	0.39	-2.2
118,587	-		BT0126	0.41	-0.5
118,682	-		BT0126	0.44	-0.0
118,834	-		BT0126	0.50	-1.4
118,913	+		BT0126	0.52	-0.2
118,914	-		BT0126	0.52	-1.5
118,918	-		BT0126	0.53	-0.1
119,009	-		BT0126	0.56	+0.4
119,023	+		BT0126	0.56	-0.0
119,130	-		BT0126	0.60	+0.2
119,133	-		BT0126	0.60	-2.0
119,153	-		BT0126	0.61	-1.6
119,201	-		BT0126	0.63	+0.6
119,273	+		BT0126	0.66	-0.7
119,274	-		BT0126	0.66	-1.0
119,364	-		BT0126	0.69	-0.5
119,453	-		BT0126	0.72	-0.6
119,500	-		BT0126	0.74	+0.6
119,538	+		BT0126	0.75	-1.4
119,541	-		BT0126	0.75	-1.1
119,546	-		BT0126	0.75	+0.4
119,620	+		BT0126	0.78	+0.0
119,621	-		BT0126	0.78	+0.4
119,621	-		BT0126	0.78	-0.3
119,720	+		BT0126	0.82	-2.4
119,721	-		BT0126	0.82	-0.6
119,723	-		BT0126	0.82	-0.6
119,918	-		BT0126	0.89	-3.6
120,222	-				+2.1
120,249	-				+0.4
120,249	-				+0.4
120,296	-				-0.6
120,311	+				+1.1
120,344	-				-1.6
120,364	+				-2.3
120,387	+				-2.3
120,405	+				-0.4
120,405	+				-0.8
120,474	+				-1.6
120,475	-				+1.5
120,475	-				-2.0
120,529	-				+1.8
120,537	-				-0.3
120,544	+				-1.4
120,545	-				-1.0
120,559	-				+0.3
120,566	-				+0.7
120,576	-				-1.8
120,655	-				-0.6
120,713	-		BT0127	0.10	-2.6
120,729	+		BT0127	0.11	+1.4
120,790	-		BT0127	0.13	+0.5
120,841	-		BT0127	0.14	-1.2
120,861	+		BT0127	0.15	+1.4
120,862	-		BT0127	0.15	-1.4
120,866	-		BT0127	0.15	-0.6
120,866	-		BT0127	0.15	-2.8
120,992	-		BT0127	0.19	+0.9
121,021	+		BT0127	0.20	+0.4
121,044	-		BT0127	0.21	+2.7
121,044	-		BT0127	0.21	-0.0
121,047	+		BT0127	0.21	-0.9
121,097	-		BT0127	0.22	+0.1