Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS15180

Experiment: Urea (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Urea (N)
3,402,422	-				-0.9
3,402,422	-				-1.1
3,402,422	-				-1.9
3,402,476	+				+1.5
3,402,476	+				-0.4
3,402,476	+				+0.7
3,402,477	-				+0.5
3,402,565	+		PFLU_RS15175	0.18	-0.1
3,402,565	+		PFLU_RS15175	0.18	-2.1
3,402,565	+		PFLU_RS15175	0.18	+3.3
3,402,565	+		PFLU_RS15175	0.18	+0.7
3,402,565	+		PFLU_RS15175	0.18	+1.1
3,402,565	+		PFLU_RS15175	0.18	-1.1
3,402,565	+		PFLU_RS15175	0.18	+1.4
3,402,565	+		PFLU_RS15175	0.18	+1.7
3,402,565	+		PFLU_RS15175	0.18	+1.2
3,402,566	-		PFLU_RS15175	0.18	+2.7
3,402,566	-		PFLU_RS15175	0.18	+0.0
3,402,566	-		PFLU_RS15175	0.18	-0.3
3,402,615	+		PFLU_RS15175	0.24	-1.7
3,402,615	+		PFLU_RS15175	0.24	-0.6
3,402,616	-		PFLU_RS15175	0.24	+1.2
3,402,623	+		PFLU_RS15175	0.25	+0.7
3,402,623	+		PFLU_RS15175	0.25	+1.5
3,402,623	+		PFLU_RS15175	0.25	-1.2
3,402,623	+		PFLU_RS15175	0.25	+0.4
3,402,623	+		PFLU_RS15175	0.25	-2.1
3,402,623	+		PFLU_RS15175	0.25	+1.4
3,402,623	+		PFLU_RS15175	0.25	-2.3
3,402,623	+		PFLU_RS15175	0.25	+0.7
3,402,623	+		PFLU_RS15175	0.25	-1.3
3,402,623	+		PFLU_RS15175	0.25	-1.7
3,402,623	+		PFLU_RS15175	0.25	+0.5
3,402,623	+		PFLU_RS15175	0.25	-1.0
3,402,623	+		PFLU_RS15175	0.25	-0.9
3,402,623	+		PFLU_RS15175	0.25	+0.7
3,402,623	+		PFLU_RS15175	0.25	-1.7
3,402,623	+		PFLU_RS15175	0.25	-1.9
3,402,623	+		PFLU_RS15175	0.25	+0.3
3,402,623	+		PFLU_RS15175	0.25	+0.3
3,402,623	+		PFLU_RS15175	0.25	+1.5
3,402,623	+		PFLU_RS15175	0.25	-1.7
3,402,623	+		PFLU_RS15175	0.25	+0.8
3,402,623	+		PFLU_RS15175	0.25	-0.9
3,402,623	+		PFLU_RS15175	0.25	+1.0
3,402,623	+		PFLU_RS15175	0.25	+0.3
3,402,623	+		PFLU_RS15175	0.25	-0.9
3,402,623	+		PFLU_RS15175	0.25	-0.5
3,402,623	+		PFLU_RS15175	0.25	-2.0
3,402,623	+		PFLU_RS15175	0.25	+1.1
3,402,623	+		PFLU_RS15175	0.25	-0.5
3,402,623	+		PFLU_RS15175	0.25	-0.4
3,402,623	+		PFLU_RS15175	0.25	-1.3
3,402,623	+		PFLU_RS15175	0.25	-0.4
3,402,623	+		PFLU_RS15175	0.25	-2.1
3,402,623	+		PFLU_RS15175	0.25	-0.5
3,402,623	+		PFLU_RS15175	0.25	+1.1
3,402,623	+		PFLU_RS15175	0.25	-0.9
3,402,623	+		PFLU_RS15175	0.25	+0.9
3,402,624	-		PFLU_RS15175	0.25	-2.1
3,402,624	-		PFLU_RS15175	0.25	+0.6
3,402,624	-		PFLU_RS15175	0.25	+1.1
3,402,624	-		PFLU_RS15175	0.25	+0.7
3,402,624	-		PFLU_RS15175	0.25	+2.7
3,402,624	-		PFLU_RS15175	0.25	-0.6
3,402,624	-		PFLU_RS15175	0.25	+0.4
3,402,624	-		PFLU_RS15175	0.25	+0.1
3,402,624	-		PFLU_RS15175	0.25	-0.3
3,402,624	-		PFLU_RS15175	0.25	-0.1
3,402,624	-		PFLU_RS15175	0.25	+1.0
3,402,624	-		PFLU_RS15175	0.25	-1.4
3,402,624	-		PFLU_RS15175	0.25	+0.3
3,402,624	-		PFLU_RS15175	0.25	-0.9
3,402,624	-		PFLU_RS15175	0.25	+2.2
3,402,624	-		PFLU_RS15175	0.25	-0.1
3,402,624	-		PFLU_RS15175	0.25	+2.2
3,402,624	-		PFLU_RS15175	0.25	+0.9
3,402,624	-		PFLU_RS15175	0.25	+0.1
3,402,624	-		PFLU_RS15175	0.25	-0.3
3,402,624	-		PFLU_RS15175	0.25	+0.9
3,402,624	-		PFLU_RS15175	0.25	-0.7
3,402,624	-		PFLU_RS15175	0.25	+0.1
3,402,624	-		PFLU_RS15175	0.25	+0.7
3,402,624	-		PFLU_RS15175	0.25	+0.5
3,402,624	-		PFLU_RS15175	0.25	+0.6
3,402,624	-		PFLU_RS15175	0.25	+1.3
3,402,624	-		PFLU_RS15175	0.25	-0.3
3,402,624	-		PFLU_RS15175	0.25	+0.4
3,402,624	-		PFLU_RS15175	0.25	+0.1
3,402,624	-		PFLU_RS15175	0.25	+0.6
3,402,624	-		PFLU_RS15175	0.25	+0.7
3,402,624	-		PFLU_RS15175	0.25	+0.6
3,402,624	-		PFLU_RS15175	0.25	-0.3
3,402,624	-		PFLU_RS15175	0.25	-0.3
3,402,627	+		PFLU_RS15175	0.25	-2.7
3,402,627	+		PFLU_RS15175	0.25	+2.1
3,402,627	+		PFLU_RS15175	0.25	-1.3
3,402,627	+		PFLU_RS15175	0.25	-0.5
3,402,627	+		PFLU_RS15175	0.25	-2.6
3,402,627	+		PFLU_RS15175	0.25	-0.5
3,402,627	+		PFLU_RS15175	0.25	+1.1
3,402,627	+		PFLU_RS15175	0.25	-1.1
3,402,627	+		PFLU_RS15175	0.25	-1.6
3,402,627	+		PFLU_RS15175	0.25	+1.1
3,402,627	+		PFLU_RS15175	0.25	-0.1
3,402,627	+		PFLU_RS15175	0.25	+0.9
3,402,628	-		PFLU_RS15175	0.25	+1.0
3,402,628	-		PFLU_RS15175	0.25	+0.6
3,402,628	-		PFLU_RS15175	0.25	-1.9
3,402,628	-		PFLU_RS15175	0.25	+1.6
3,402,628	-		PFLU_RS15175	0.25	-0.6
3,402,628	-		PFLU_RS15175	0.25	+1.0
3,402,628	-		PFLU_RS15175	0.25	-0.9
3,402,628	-		PFLU_RS15175	0.25	-0.1
3,402,628	-		PFLU_RS15175	0.25	-1.6
3,402,628	-		PFLU_RS15175	0.25	+0.2
3,402,628	-		PFLU_RS15175	0.25	-2.3
3,402,628	-		PFLU_RS15175	0.25	-1.3
3,402,628	-		PFLU_RS15175	0.25	+0.4
3,402,698	-		PFLU_RS15175	0.33	+0.3
3,402,698	-		PFLU_RS15175	0.33	-0.6
3,402,804	-		PFLU_RS15175	0.45	+0.7
3,402,811	-		PFLU_RS15175	0.45	+0.5
3,402,853	-		PFLU_RS15175	0.50	-0.9
3,403,003	-		PFLU_RS15175	0.67	-1.7
3,403,003	-		PFLU_RS15175	0.67	+0.1
3,403,003	-		PFLU_RS15175	0.67	+0.4
3,403,003	-		PFLU_RS15175	0.67	+0.7
3,403,003	-		PFLU_RS15175	0.67	+0.2
3,403,039	-		PFLU_RS15175	0.71	+0.1
3,403,134	+		PFLU_RS15175	0.81	+0.4
3,403,134	+		PFLU_RS15175	0.81	+0.7
3,403,134	+		PFLU_RS15175	0.81	-0.7
3,403,135	-		PFLU_RS15175	0.81	-0.0
3,403,135	-		PFLU_RS15175	0.81	+0.3
3,403,135	-		PFLU_RS15175	0.81	+1.2
3,403,297	+				+1.4
3,403,297	+				+0.6
3,403,297	+				+0.3
3,403,297	+				+0.9
3,403,297	+				-0.3
3,403,297	+				+2.7
3,403,297	+				-1.6
3,403,297	+				-0.0
3,403,297	+				+0.4
3,403,297	+				+0.6
3,403,297	+				-0.0
3,403,298	-				+0.7
3,403,298	-				+0.7
3,403,298	-				-0.6
3,403,298	-				+0.5
3,403,298	-				-0.7
3,403,298	-				+0.1
3,403,298	-				-0.3
3,403,298	-				-0.5
3,403,298	-				+2.6
3,403,298	-				-0.9
3,403,298	-				-0.5
3,403,298	-				+0.3
3,403,298	-				+2.1
3,403,298	-				-1.3
3,403,298	-				+1.8
3,403,298	-				-0.6
3,403,332	+				+1.2
3,403,398	+				-0.0
3,403,410	-				+0.2
3,403,563	+		PFLU_RS15180	0.34	-0.1
3,403,563	+		PFLU_RS15180	0.34	+0.6
3,403,563	+		PFLU_RS15180	0.34	-0.3
3,403,563	+		PFLU_RS15180	0.34	+1.3
3,403,564	-		PFLU_RS15180	0.34	-0.0
3,403,564	-		PFLU_RS15180	0.34	-0.1
3,403,596	+		PFLU_RS15180	0.41	+1.1
3,403,597	-		PFLU_RS15180	0.42	-0.7
3,403,783	-		PFLU_RS15180	0.84	+0.7
3,403,783	-		PFLU_RS15180	0.84	+1.3
3,403,783	-		PFLU_RS15180	0.84	-0.5
3,403,851	+				+0.2
3,403,880	+				+1.7
3,403,880	+				-1.3
3,403,880	+				+2.1
3,403,880	+				+0.4
3,403,881	-				-1.4
3,403,881	-				-0.3
3,403,881	-				-1.3
3,403,881	-				+0.6
3,403,881	-				+0.1
3,403,881	-				-1.1
3,403,917	+				-0.5
3,403,917	+				+1.7
3,403,917	+				+1.4
3,403,917	+				+1.0
3,403,917	+				-0.7
3,403,917	+				+0.7
3,403,918	-				+0.6
3,403,918	-				+0.5
3,403,918	-				-0.9
3,403,918	-				+1.7
3,403,918	-				-0.9
3,403,918	-				-0.3
3,403,918	-				-1.3
3,403,918	-				+1.3
3,403,957	+				-1.3
3,403,957	+				+1.1
3,403,957	+				+1.5
3,403,957	+				-2.1
3,403,957	+				+0.5
3,403,957	+				-1.7
3,403,957	+				-0.7
3,403,957	+				-1.6
3,403,958	-				-1.3
3,403,958	-				-1.0
3,403,958	-				+0.2
3,403,958	-				-0.1
3,403,958	-				+1.1
3,403,962	+				-1.6
3,403,970	+				-0.0
3,403,970	+				+0.3
3,403,970	+				-0.9
3,403,970	+				+0.7
3,403,970	+				-1.3
3,403,970	+				-2.3
3,403,970	+				+0.7
3,403,970	+				-0.5
3,403,970	+				+1.7
3,403,970	+				+1.1
3,403,970	+				+0.1
3,403,970	+				+2.0
3,403,970	+				+2.2
3,403,970	+				+0.3
3,403,970	+				+0.2
3,403,970	+				+0.1
3,403,970	+				-0.0
3,403,970	+				-0.3
3,403,970	+				-0.3
3,403,970	+				-1.3
3,403,970	+				+0.7
3,403,970	+				+1.2
3,403,970	+				-0.9
3,403,970	+				+0.2
3,403,971	-				+1.1
3,403,971	-				-1.1
3,403,971	-				-0.6
3,403,971	-				-0.3
3,403,971	-				+0.7
3,403,971	-				+0.8
3,403,971	-				+0.7
3,403,971	-				-1.3
3,403,971	-				-0.1
3,403,971	-				+3.1
3,403,971	-				+1.7
3,403,971	-				-0.3
3,403,971	-				-0.3
3,403,971	-				-1.3
3,403,971	-				-1.3
3,403,971	-				-0.4
3,403,971	-				+1.6
3,403,971	-				-1.3
3,403,971	-				-0.0
3,403,973	+				-0.0
3,403,973	+				-1.3
3,403,973	+				+0.3
3,403,973	+				+0.5
3,403,974	-				+0.7
3,403,981	+				-1.9
3,404,012	+				-1.1
3,404,012	+				-1.6
3,404,012	+				+0.7
3,404,012	+				-0.6
3,404,012	+				-0.7
3,404,013	-				+0.7
3,404,013	-				-1.6
3,404,013	-				+0.1
3,404,013	-				+0.1
3,404,036	+		PFLU_RS15185	0.11	-0.9
3,404,037	-		PFLU_RS15185	0.11	-0.7
3,404,037	-		PFLU_RS15185	0.11	+0.7
3,404,043	+		PFLU_RS15185	0.12	-0.3
3,404,043	+		PFLU_RS15185	0.12	-1.6
3,404,044	-		PFLU_RS15185	0.12	+0.4
3,404,143	-		PFLU_RS15185	0.29	+1.0
3,404,192	+		PFLU_RS15185	0.38	+0.0
3,404,192	+		PFLU_RS15185	0.38	-2.1
3,404,193	-		PFLU_RS15185	0.38	+0.2
3,404,193	-		PFLU_RS15185	0.38	+0.1
3,404,193	-		PFLU_RS15185	0.38	+0.3
3,404,193	-		PFLU_RS15185	0.38	+0.2
3,404,224	+		PFLU_RS15185	0.43	+0.3
3,404,225	-		PFLU_RS15185	0.44	-0.5
3,404,225	-		PFLU_RS15185	0.44	-0.9
3,404,240	+		PFLU_RS15185	0.46	+1.1
3,404,240	+		PFLU_RS15185	0.46	-1.3
3,404,240	+		PFLU_RS15185	0.46	+0.1
3,404,240	+		PFLU_RS15185	0.46	+0.3
3,404,240	+		PFLU_RS15185	0.46	-2.6
3,404,240	+		PFLU_RS15185	0.46	+0.9
3,404,240	+		PFLU_RS15185	0.46	-1.6
3,404,240	+		PFLU_RS15185	0.46	+1.7
3,404,241	-		PFLU_RS15185	0.46	+1.2
3,404,241	-		PFLU_RS15185	0.46	+1.1
3,404,241	-		PFLU_RS15185	0.46	+0.5
3,404,241	-		PFLU_RS15185	0.46	+0.5
3,404,241	-		PFLU_RS15185	0.46	-1.0
3,404,242	+		PFLU_RS15185	0.47	-0.3
3,404,243	-		PFLU_RS15185	0.47	-1.1
3,404,243	-		PFLU_RS15185	0.47	-1.3
3,404,243	-		PFLU_RS15185	0.47	-1.3
3,404,243	-		PFLU_RS15185	0.47	-1.9
3,404,243	-		PFLU_RS15185	0.47	+0.7
3,404,243	-		PFLU_RS15185	0.47	+1.3
3,404,324	-		PFLU_RS15185	0.61	+0.7
3,404,341	+		PFLU_RS15185	0.64	+0.1
3,404,342	-		PFLU_RS15185	0.64	-0.0
3,404,342	-		PFLU_RS15185	0.64	+1.0
3,404,342	-		PFLU_RS15185	0.64	+0.5
3,404,361	+		PFLU_RS15185	0.67	-0.3
3,404,361	+		PFLU_RS15185	0.67	+1.7
3,404,362	-		PFLU_RS15185	0.67	-0.0
3,404,362	-		PFLU_RS15185	0.67	-2.1
3,404,366	-		PFLU_RS15185	0.68	+0.5
3,404,387	-		PFLU_RS15185	0.72	+0.7
3,404,405	-		PFLU_RS15185	0.75	-1.9
3,404,438	+		PFLU_RS15185	0.81	+1.0
3,404,438	+		PFLU_RS15185	0.81	-0.3
3,404,440	+		PFLU_RS15185	0.81	-0.6
3,404,440	+		PFLU_RS15185	0.81	-0.9
3,404,440	+		PFLU_RS15185	0.81	+1.1
3,404,440	+		PFLU_RS15185	0.81	-0.9
3,404,440	+		PFLU_RS15185	0.81	-0.3
3,404,440	+		PFLU_RS15185	0.81	-1.4
3,404,440	+		PFLU_RS15185	0.81	-0.8
3,404,441	-		PFLU_RS15185	0.81	-0.6
3,404,441	-		PFLU_RS15185	0.81	-0.5
3,404,441	-		PFLU_RS15185	0.81	-0.3
3,404,441	-		PFLU_RS15185	0.81	+0.6
3,404,441	-		PFLU_RS15185	0.81	-0.4
3,404,441	-		PFLU_RS15185	0.81	-0.3
3,404,441	-		PFLU_RS15185	0.81	-0.4
3,404,441	-		PFLU_RS15185	0.81	+0.3
3,404,441	-		PFLU_RS15185	0.81	-0.2
3,404,441	-		PFLU_RS15185	0.81	-0.3
3,404,441	-		PFLU_RS15185	0.81	-2.4
3,404,441	-		PFLU_RS15185	0.81	+0.1
3,404,441	-		PFLU_RS15185	0.81	-0.1
3,404,444	+		PFLU_RS15185	0.82	+0.8
3,404,445	-		PFLU_RS15185	0.82	-1.3
3,404,445	-		PFLU_RS15185	0.82	+0.1
3,404,445	-		PFLU_RS15185	0.82	+0.3
3,404,445	-		PFLU_RS15185	0.82	-0.3
3,404,445	-		PFLU_RS15185	0.82	-0.0
3,404,469	+		PFLU_RS15185	0.86	-0.3
3,404,469	+		PFLU_RS15185	0.86	-1.6
3,404,469	+		PFLU_RS15185	0.86	-3.2
3,404,469	+		PFLU_RS15185	0.86	+0.7
3,404,470	-		PFLU_RS15185	0.86	+0.7
3,404,470	-		PFLU_RS15185	0.86	-1.4
3,404,470	-		PFLU_RS15185	0.86	-0.3
3,404,470	-		PFLU_RS15185	0.86	-1.3
3,404,470	-		PFLU_RS15185	0.86	-0.9
3,404,502	-				+0.6
3,404,522	+				-1.1
3,404,522	+				+2.7
3,404,522	+				+0.7
3,404,523	-				-2.4
3,404,523	-				+1.8
3,404,523	-				-1.1
3,404,523	-				+1.1
3,404,523	-				+0.1
3,404,523	-				-0.5
3,404,523	-				+0.1
3,404,525	+				-1.3
3,404,526	-				-1.5
3,404,590	+				+0.3
3,404,590	+				+1.1
3,404,590	+				+1.2
3,404,590	+				-0.6
3,404,590	+				+1.1
3,404,591	-				+0.7
3,404,591	-				+0.7
3,404,591	-				-2.1
3,404,607	+				+1.1
3,404,607	+				+1.7
3,404,607	+				+0.5
3,404,607	+				+0.9
3,404,607	+				-0.3
3,404,607	+				-0.9
3,404,607	+				+2.4
3,404,607	+				+0.2
3,404,607	+				-0.9
3,404,607	+				+0.4
3,404,607	+				+1.5
3,404,607	+				-0.1
3,404,607	+				-1.9
3,404,608	-				+0.4
3,404,608	-				+0.1
3,404,608	-				-0.3
3,404,608	-				-0.0
3,404,608	-				+0.7
3,404,608	-				+0.4
3,404,608	-				-1.9
3,404,608	-				+2.3
3,404,608	-				+0.5
3,404,608	-				-0.7
3,404,608	-				+0.2
3,404,608	-				-1.6
3,404,610	-				+0.3
3,404,632	+				+0.3
3,404,633	-				+0.9
3,404,649	+				-1.9
3,404,650	-				-0.1
3,404,651	+				-0.1
3,404,651	+				+0.1
3,404,651	+				+2.5
3,404,651	+				-1.3
3,404,651	+				-1.4
3,404,651	+				+0.1
3,404,652	-				+1.3
3,404,652	-				-1.0
3,404,683	+		PFLU_RS15190	0.11	-1.3
3,404,683	+		PFLU_RS15190	0.11	+0.7
3,404,684	-		PFLU_RS15190	0.11	+1.3
3,404,684	-		PFLU_RS15190	0.11	+1.0
3,404,709	+		PFLU_RS15190	0.13	-1.1
3,404,807	+		PFLU_RS15190	0.19	-1.1
3,404,807	+		PFLU_RS15190	0.19	+1.0