Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1475 and Ga0059261_1476 overlap by 4 nucleotides Ga0059261_1476 and Ga0059261_1477 overlap by 1 nucleotides Ga0059261_1477 and Ga0059261_1478 are separated by 144 nucleotides Ga0059261_1478 and Ga0059261_1479 overlap by 4 nucleotides
Ga0059261_1475: Ga0059261_1475 - cysteine desulfurases, SufSfamily, at 1,559,552 to 1,560,763
_1475
Ga0059261_1476: Ga0059261_1476 - FeS assembly SUF system protein, at 1,560,760 to 1,561,227
_1476
Ga0059261_1477: Ga0059261_1477 - Iron-sulfur cluster assembly accessory protein, at 1,561,227 to 1,561,583
_1477
Ga0059261_1478: Ga0059261_1478 - Predicted dioxygenase of extradiol dioxygenase family, at 1,561,728 to 1,562,144
_1478
Ga0059261_1479: Ga0059261_1479 - Lactate dehydrogenase and related dehydrogenases, at 1,562,141 to 1,563,139
_1479
Position (kb)
1561
1562
1563 Strain fitness (log2 ratio)
-1
0
1 at 1561.729 kb on + strand at 1561.729 kb on + strand at 1561.729 kb on + strand at 1561.729 kb on + strand at 1561.730 kb on - strand at 1562.083 kb on + strand, within Ga0059261_1478 at 1562.083 kb on + strand, within Ga0059261_1478 at 1562.084 kb on - strand, within Ga0059261_1478 at 1562.201 kb on - strand at 1562.241 kb on + strand, within Ga0059261_1479 at 1562.241 kb on + strand, within Ga0059261_1479 at 1562.241 kb on + strand, within Ga0059261_1479 at 1562.241 kb on + strand, within Ga0059261_1479 at 1562.241 kb on + strand, within Ga0059261_1479 at 1562.241 kb on + strand, within Ga0059261_1479 at 1562.241 kb on + strand, within Ga0059261_1479 at 1562.241 kb on + strand, within Ga0059261_1479 at 1562.241 kb on + strand, within Ga0059261_1479 at 1562.242 kb on - strand at 1562.242 kb on - strand, within Ga0059261_1479 at 1562.242 kb on - strand, within Ga0059261_1479 at 1562.242 kb on - strand, within Ga0059261_1479 at 1562.242 kb on - strand, within Ga0059261_1479 at 1562.242 kb on - strand, within Ga0059261_1479 at 1562.242 kb on - strand, within Ga0059261_1479 at 1562.242 kb on - strand, within Ga0059261_1479 at 1562.257 kb on + strand, within Ga0059261_1479 at 1562.257 kb on + strand, within Ga0059261_1479 at 1562.257 kb on + strand, within Ga0059261_1479 at 1562.258 kb on - strand, within Ga0059261_1479 at 1562.258 kb on - strand, within Ga0059261_1479 at 1562.418 kb on + strand, within Ga0059261_1479 at 1562.418 kb on + strand, within Ga0059261_1479 at 1562.418 kb on + strand, within Ga0059261_1479 at 1562.418 kb on + strand, within Ga0059261_1479 at 1562.419 kb on - strand, within Ga0059261_1479 at 1562.419 kb on - strand, within Ga0059261_1479 at 1562.507 kb on + strand, within Ga0059261_1479 at 1562.595 kb on + strand, within Ga0059261_1479 at 1562.595 kb on + strand, within Ga0059261_1479 at 1562.595 kb on + strand, within Ga0059261_1479 at 1562.596 kb on - strand, within Ga0059261_1479 at 1562.596 kb on - strand, within Ga0059261_1479 at 1562.875 kb on + strand, within Ga0059261_1479 at 1562.953 kb on + strand, within Ga0059261_1479 at 1562.953 kb on + strand, within Ga0059261_1479 at 1562.953 kb on + strand, within Ga0059261_1479 at 1562.954 kb on - strand, within Ga0059261_1479 at 1563.046 kb on + strand at 1563.134 kb on + strand at 1563.134 kb on + strand at 1563.134 kb on + strand at 1563.135 kb on - strand at 1563.135 kb on - strand at 1563.135 kb on - strand at 1563.135 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.01 mg/ml remove 1,561,729 + -0.2 1,561,729 + -0.0 1,561,729 + +0.0 1,561,729 + -0.7 1,561,730 - -0.4 1,562,083 + Ga0059261_1478 0.85 -0.1 1,562,083 + Ga0059261_1478 0.85 +0.2 1,562,084 - Ga0059261_1478 0.85 +0.4 1,562,201 - +0.5 1,562,241 + Ga0059261_1479 0.10 -0.6 1,562,241 + Ga0059261_1479 0.10 +0.7 1,562,241 + Ga0059261_1479 0.10 -0.7 1,562,241 + Ga0059261_1479 0.10 +0.3 1,562,241 + Ga0059261_1479 0.10 +0.3 1,562,241 + Ga0059261_1479 0.10 +0.3 1,562,241 + Ga0059261_1479 0.10 -0.1 1,562,241 + Ga0059261_1479 0.10 +0.3 1,562,241 + Ga0059261_1479 0.10 -0.4 1,562,242 - +0.7 1,562,242 - Ga0059261_1479 0.10 -0.7 1,562,242 - Ga0059261_1479 0.10 +0.0 1,562,242 - Ga0059261_1479 0.10 +0.2 1,562,242 - Ga0059261_1479 0.10 -0.2 1,562,242 - Ga0059261_1479 0.10 +0.6 1,562,242 - Ga0059261_1479 0.10 -0.2 1,562,242 - Ga0059261_1479 0.10 -0.8 1,562,257 + Ga0059261_1479 0.12 -0.1 1,562,257 + Ga0059261_1479 0.12 +0.5 1,562,257 + Ga0059261_1479 0.12 +1.2 1,562,258 - Ga0059261_1479 0.12 +0.7 1,562,258 - Ga0059261_1479 0.12 +0.2 1,562,418 + Ga0059261_1479 0.28 -0.5 1,562,418 + Ga0059261_1479 0.28 +0.8 1,562,418 + Ga0059261_1479 0.28 -0.1 1,562,418 + Ga0059261_1479 0.28 -0.7 1,562,419 - Ga0059261_1479 0.28 +0.5 1,562,419 - Ga0059261_1479 0.28 +0.9 1,562,507 + Ga0059261_1479 0.37 +0.0 1,562,595 + Ga0059261_1479 0.45 +0.2 1,562,595 + Ga0059261_1479 0.45 -0.8 1,562,595 + Ga0059261_1479 0.45 -0.5 1,562,596 - Ga0059261_1479 0.46 -0.5 1,562,596 - Ga0059261_1479 0.46 -0.7 1,562,875 + Ga0059261_1479 0.73 +0.7 1,562,953 + Ga0059261_1479 0.81 -0.6 1,562,953 + Ga0059261_1479 0.81 -0.4 1,562,953 + Ga0059261_1479 0.81 -1.2 1,562,954 - Ga0059261_1479 0.81 -0.3 1,563,046 + +0.3 1,563,134 + -0.1 1,563,134 + -1.0 1,563,134 + -0.5 1,563,135 - -0.8 1,563,135 - +0.3 1,563,135 - +0.7 1,563,135 - -0.4
Or see this region's nucleotide sequence