Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0447 and Ga0059261_0448 are separated by 140 nucleotides Ga0059261_0448 and Ga0059261_0449 are separated by 128 nucleotides Ga0059261_0449 and Ga0059261_0450 are separated by 3 nucleotides
Ga0059261_0447: Ga0059261_0447 - SnoaL-like domain, at 433,804 to 434,274
_0447
Ga0059261_0448: Ga0059261_0448 - hypothetical protein, at 434,415 to 434,702
_0448
Ga0059261_0449: Ga0059261_0449 - Uncharacterized protein, homolog of Cu resistance protein CopC, at 434,831 to 435,217
_0449
Ga0059261_0450: Ga0059261_0450 - Putative copper export protein, at 435,221 to 436,143
_0450
Position (kb) 434
435
436 Strain fitness (log2 ratio) -2
-1
0
1
2 at 433.935 kb on + strand, within Ga0059261_0447 at 433.936 kb on - strand, within Ga0059261_0447 at 433.937 kb on + strand, within Ga0059261_0447 at 433.937 kb on + strand, within Ga0059261_0447 at 433.937 kb on + strand, within Ga0059261_0447 at 433.937 kb on + strand, within Ga0059261_0447 at 433.938 kb on - strand, within Ga0059261_0447 at 433.938 kb on - strand, within Ga0059261_0447 at 433.989 kb on - strand, within Ga0059261_0447 at 433.989 kb on - strand, within Ga0059261_0447 at 434.048 kb on + strand, within Ga0059261_0447 at 434.049 kb on - strand, within Ga0059261_0447 at 434.049 kb on - strand, within Ga0059261_0447 at 434.153 kb on + strand, within Ga0059261_0447 at 434.153 kb on + strand, within Ga0059261_0447 at 434.154 kb on - strand, within Ga0059261_0447 at 434.297 kb on + strand at 434.298 kb on - strand at 434.298 kb on - strand at 434.298 kb on - strand at 434.597 kb on - strand, within Ga0059261_0448 at 434.647 kb on - strand, within Ga0059261_0448 at 434.724 kb on + strand at 434.724 kb on + strand at 434.724 kb on + strand at 434.725 kb on - strand at 434.725 kb on - strand at 434.752 kb on - strand at 434.825 kb on + strand at 434.825 kb on + strand at 434.826 kb on - strand at 434.826 kb on - strand at 434.826 kb on - strand at 435.143 kb on + strand, within Ga0059261_0449 at 435.143 kb on + strand, within Ga0059261_0449 at 435.143 kb on + strand, within Ga0059261_0449 at 435.143 kb on + strand, within Ga0059261_0449 at 435.143 kb on + strand, within Ga0059261_0449 at 435.144 kb on - strand, within Ga0059261_0449 at 435.144 kb on - strand, within Ga0059261_0449 at 435.144 kb on - strand, within Ga0059261_0449 at 435.144 kb on - strand, within Ga0059261_0449 at 435.144 kb on - strand, within Ga0059261_0449 at 435.144 kb on - strand, within Ga0059261_0449 at 435.215 kb on + strand at 435.260 kb on + strand at 435.260 kb on + strand at 435.261 kb on - strand at 435.261 kb on - strand at 435.543 kb on + strand, within Ga0059261_0450 at 435.543 kb on + strand, within Ga0059261_0450 at 435.544 kb on - strand, within Ga0059261_0450 at 435.569 kb on + strand, within Ga0059261_0450 at 435.569 kb on + strand, within Ga0059261_0450 at 435.570 kb on - strand, within Ga0059261_0450 at 435.570 kb on - strand, within Ga0059261_0450 at 435.649 kb on + strand, within Ga0059261_0450 at 435.650 kb on - strand, within Ga0059261_0450 at 435.740 kb on + strand, within Ga0059261_0450 at 435.882 kb on + strand, within Ga0059261_0450 at 436.038 kb on - strand, within Ga0059261_0450 at 436.118 kb on + strand at 436.118 kb on + strand at 436.141 kb on + strand at 436.141 kb on + strand at 436.141 kb on + strand at 436.142 kb on - strand at 436.142 kb on - strand at 436.142 kb on - strand at 436.142 kb on - strand at 436.142 kb on - strand at 436.142 kb on - strand at 436.186 kb on + strand at 436.186 kb on + strand at 436.187 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.01 mg/ml remove 433,935 + Ga0059261_0447 0.28 -0.6 433,936 - Ga0059261_0447 0.28 -0.1 433,937 + Ga0059261_0447 0.28 -0.5 433,937 + Ga0059261_0447 0.28 +0.0 433,937 + Ga0059261_0447 0.28 +0.4 433,937 + Ga0059261_0447 0.28 -2.1 433,938 - Ga0059261_0447 0.28 +0.7 433,938 - Ga0059261_0447 0.28 +0.4 433,989 - Ga0059261_0447 0.39 +0.0 433,989 - Ga0059261_0447 0.39 -0.1 434,048 + Ga0059261_0447 0.52 -1.3 434,049 - Ga0059261_0447 0.52 +2.5 434,049 - Ga0059261_0447 0.52 +0.4 434,153 + Ga0059261_0447 0.74 +0.6 434,153 + Ga0059261_0447 0.74 -0.3 434,154 - Ga0059261_0447 0.74 -0.8 434,297 + +0.1 434,298 - -0.3 434,298 - +0.5 434,298 - -0.2 434,597 - Ga0059261_0448 0.63 -0.1 434,647 - Ga0059261_0448 0.81 -0.9 434,724 + +0.1 434,724 + -2.3 434,724 + +0.1 434,725 - -0.6 434,725 - +0.4 434,752 - +0.4 434,825 + +0.1 434,825 + -0.8 434,826 - +0.0 434,826 - +0.5 434,826 - +1.6 435,143 + Ga0059261_0449 0.81 -0.6 435,143 + Ga0059261_0449 0.81 +2.3 435,143 + Ga0059261_0449 0.81 +0.5 435,143 + Ga0059261_0449 0.81 +1.2 435,143 + Ga0059261_0449 0.81 +0.8 435,144 - Ga0059261_0449 0.81 +0.5 435,144 - Ga0059261_0449 0.81 +0.5 435,144 - Ga0059261_0449 0.81 -0.4 435,144 - Ga0059261_0449 0.81 -0.3 435,144 - Ga0059261_0449 0.81 -0.2 435,144 - Ga0059261_0449 0.81 -0.1 435,215 + -1.3 435,260 + +0.5 435,260 + -0.1 435,261 - -0.4 435,261 - -0.4 435,543 + Ga0059261_0450 0.35 -0.4 435,543 + Ga0059261_0450 0.35 +0.7 435,544 - Ga0059261_0450 0.35 +0.6 435,569 + Ga0059261_0450 0.38 +0.3 435,569 + Ga0059261_0450 0.38 +0.5 435,570 - Ga0059261_0450 0.38 -0.6 435,570 - Ga0059261_0450 0.38 +0.2 435,649 + Ga0059261_0450 0.46 +0.1 435,650 - Ga0059261_0450 0.46 -1.1 435,740 + Ga0059261_0450 0.56 +0.1 435,882 + Ga0059261_0450 0.72 -0.5 436,038 - Ga0059261_0450 0.89 -1.1 436,118 + +0.8 436,118 + -0.3 436,141 + -0.2 436,141 + +0.9 436,141 + +0.8 436,142 - -0.7 436,142 - +1.4 436,142 - +0.3 436,142 - -0.2 436,142 - +0.4 436,142 - +0.1 436,186 + +0.2 436,186 + -0.3 436,187 - -0.3
Or see this region's nucleotide sequence