Experiment: Lomefloxacin 0.001 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22805 and AO353_22810 are separated by 15 nucleotides AO353_22810 and AO353_22815 are separated by 77 nucleotides AO353_22815 and AO353_22820 are separated by 504 nucleotides
AO353_22805: AO353_22805 - LacI family transcriptional regulator, at 4,997,753 to 4,998,838
_22805
AO353_22810: AO353_22810 - hypothetical protein, at 4,998,854 to 4,999,072
_22810
AO353_22815: AO353_22815 - hypothetical protein, at 4,999,150 to 4,999,506
_22815
AO353_22820: AO353_22820 - NAD-glutamate dehydrogenase, at 5,000,011 to 5,004,912
_22820
Position (kb)
4998
4999
5000 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4997.873 kb on + strand, within AO353_22805 at 4997.873 kb on + strand, within AO353_22805 at 4997.874 kb on - strand, within AO353_22805 at 4997.874 kb on - strand, within AO353_22805 at 4997.874 kb on - strand, within AO353_22805 at 4998.003 kb on - strand, within AO353_22805 at 4998.003 kb on - strand, within AO353_22805 at 4998.003 kb on - strand, within AO353_22805 at 4998.026 kb on + strand, within AO353_22805 at 4998.026 kb on + strand, within AO353_22805 at 4998.026 kb on + strand, within AO353_22805 at 4998.026 kb on + strand, within AO353_22805 at 4998.026 kb on + strand, within AO353_22805 at 4998.026 kb on + strand, within AO353_22805 at 4998.027 kb on - strand, within AO353_22805 at 4998.027 kb on - strand, within AO353_22805 at 4998.027 kb on - strand, within AO353_22805 at 4998.027 kb on - strand, within AO353_22805 at 4998.027 kb on - strand, within AO353_22805 at 4998.027 kb on - strand, within AO353_22805 at 4998.027 kb on - strand, within AO353_22805 at 4998.027 kb on - strand, within AO353_22805 at 4998.080 kb on - strand, within AO353_22805 at 4998.189 kb on - strand, within AO353_22805 at 4998.480 kb on - strand, within AO353_22805 at 4998.480 kb on - strand at 4998.533 kb on - strand, within AO353_22805 at 4998.533 kb on - strand, within AO353_22805 at 4998.533 kb on - strand, within AO353_22805 at 4998.575 kb on - strand, within AO353_22805 at 4998.575 kb on - strand, within AO353_22805 at 4998.575 kb on - strand, within AO353_22805 at 4998.575 kb on - strand, within AO353_22805 at 4998.575 kb on - strand, within AO353_22805 at 4998.575 kb on - strand, within AO353_22805 at 4998.579 kb on + strand, within AO353_22805 at 4998.580 kb on - strand, within AO353_22805 at 4998.580 kb on - strand, within AO353_22805 at 4998.580 kb on - strand, within AO353_22805 at 4998.586 kb on - strand, within AO353_22805 at 4998.635 kb on + strand, within AO353_22805 at 4998.635 kb on + strand, within AO353_22805 at 4998.635 kb on + strand, within AO353_22805 at 4998.635 kb on + strand, within AO353_22805 at 4998.635 kb on + strand, within AO353_22805 at 4998.636 kb on - strand, within AO353_22805 at 4998.636 kb on - strand, within AO353_22805 at 4998.752 kb on + strand at 4998.752 kb on + strand at 4998.752 kb on + strand at 4998.752 kb on + strand at 4998.753 kb on - strand at 4998.753 kb on - strand at 4998.753 kb on - strand at 4998.753 kb on - strand at 4998.753 kb on - strand at 4998.801 kb on - strand at 4998.855 kb on + strand at 4998.996 kb on - strand, within AO353_22810 at 4999.072 kb on + strand at 4999.072 kb on + strand at 4999.072 kb on + strand at 4999.072 kb on + strand at 4999.073 kb on - strand at 4999.094 kb on + strand at 4999.094 kb on + strand at 4999.094 kb on + strand at 4999.094 kb on + strand at 4999.094 kb on + strand at 4999.095 kb on - strand at 4999.095 kb on - strand at 4999.095 kb on - strand at 4999.095 kb on - strand at 4999.098 kb on - strand at 4999.098 kb on - strand at 4999.107 kb on + strand at 4999.107 kb on + strand at 4999.107 kb on + strand at 4999.108 kb on - strand at 4999.108 kb on - strand at 4999.108 kb on - strand at 4999.169 kb on + strand at 4999.169 kb on + strand at 4999.169 kb on + strand at 4999.169 kb on + strand at 4999.169 kb on + strand at 4999.169 kb on + strand at 4999.169 kb on + strand at 4999.169 kb on + strand at 4999.169 kb on + strand at 4999.169 kb on + strand at 4999.170 kb on - strand at 4999.170 kb on - strand at 4999.170 kb on - strand at 4999.170 kb on - strand at 4999.170 kb on - strand at 4999.294 kb on + strand, within AO353_22815 at 4999.533 kb on + strand at 4999.613 kb on + strand at 4999.614 kb on - strand at 4999.664 kb on - strand at 4999.720 kb on + strand at 4999.720 kb on + strand at 4999.720 kb on + strand at 4999.720 kb on + strand at 4999.720 kb on + strand at 4999.720 kb on + strand at 4999.720 kb on + strand at 4999.721 kb on - strand at 4999.721 kb on - strand at 4999.721 kb on - strand at 4999.721 kb on - strand at 4999.721 kb on - strand at 4999.724 kb on + strand at 4999.738 kb on + strand at 4999.738 kb on + strand at 4999.804 kb on + strand at 4999.805 kb on - strand at 4999.805 kb on - strand at 4999.985 kb on + strand at 4999.985 kb on + strand at 4999.986 kb on - strand at 4999.986 kb on - strand at 5000.003 kb on + strand at 5000.003 kb on + strand at 5000.003 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Lomefloxacin 0.001 mM remove 4,997,873 + AO353_22805 0.11 +0.9 4,997,873 + AO353_22805 0.11 -1.7 4,997,874 - AO353_22805 0.11 -0.5 4,997,874 - AO353_22805 0.11 +1.8 4,997,874 - AO353_22805 0.11 -1.1 4,998,003 - AO353_22805 0.23 -2.7 4,998,003 - AO353_22805 0.23 -0.2 4,998,003 - AO353_22805 0.23 -2.5 4,998,026 + AO353_22805 0.25 -1.6 4,998,026 + AO353_22805 0.25 -0.5 4,998,026 + AO353_22805 0.25 +1.5 4,998,026 + AO353_22805 0.25 +1.7 4,998,026 + AO353_22805 0.25 +0.8 4,998,026 + AO353_22805 0.25 -1.1 4,998,027 - AO353_22805 0.25 +1.1 4,998,027 - AO353_22805 0.25 +0.0 4,998,027 - AO353_22805 0.25 +0.6 4,998,027 - AO353_22805 0.25 +0.3 4,998,027 - AO353_22805 0.25 +1.1 4,998,027 - AO353_22805 0.25 -1.8 4,998,027 - AO353_22805 0.25 -1.4 4,998,027 - AO353_22805 0.25 -0.2 4,998,080 - AO353_22805 0.30 -1.3 4,998,189 - AO353_22805 0.40 +1.5 4,998,480 - AO353_22805 0.67 -0.7 4,998,480 - +0.8 4,998,533 - AO353_22805 0.72 -1.2 4,998,533 - AO353_22805 0.72 -0.1 4,998,533 - AO353_22805 0.72 -2.4 4,998,575 - AO353_22805 0.76 -1.6 4,998,575 - AO353_22805 0.76 +1.0 4,998,575 - AO353_22805 0.76 +0.9 4,998,575 - AO353_22805 0.76 -1.5 4,998,575 - AO353_22805 0.76 -0.7 4,998,575 - AO353_22805 0.76 -1.6 4,998,579 + AO353_22805 0.76 -0.2 4,998,580 - AO353_22805 0.76 -1.5 4,998,580 - AO353_22805 0.76 -1.9 4,998,580 - AO353_22805 0.76 +0.0 4,998,586 - AO353_22805 0.77 -0.5 4,998,635 + AO353_22805 0.81 +0.7 4,998,635 + AO353_22805 0.81 -0.3 4,998,635 + AO353_22805 0.81 -0.2 4,998,635 + AO353_22805 0.81 -1.1 4,998,635 + AO353_22805 0.81 -0.6 4,998,636 - AO353_22805 0.81 +0.5 4,998,636 - AO353_22805 0.81 +0.1 4,998,752 + -0.9 4,998,752 + -0.9 4,998,752 + -0.7 4,998,752 + -0.9 4,998,753 - -2.0 4,998,753 - -2.5 4,998,753 - -0.7 4,998,753 - -1.5 4,998,753 - +1.1 4,998,801 - -1.1 4,998,855 + -0.1 4,998,996 - AO353_22810 0.65 -1.3 4,999,072 + -0.1 4,999,072 + +0.3 4,999,072 + +1.7 4,999,072 + +1.6 4,999,073 - +3.1 4,999,094 + +0.3 4,999,094 + +0.4 4,999,094 + +0.5 4,999,094 + +2.1 4,999,094 + -0.8 4,999,095 - -1.2 4,999,095 - +0.1 4,999,095 - +0.5 4,999,095 - -0.2 4,999,098 - -1.1 4,999,098 - -0.2 4,999,107 + -1.2 4,999,107 + +1.3 4,999,107 + -1.1 4,999,108 - -0.2 4,999,108 - +1.3 4,999,108 - +0.1 4,999,169 + -0.6 4,999,169 + +0.5 4,999,169 + +0.5 4,999,169 + -0.5 4,999,169 + +1.7 4,999,169 + -1.6 4,999,169 + -0.2 4,999,169 + -0.7 4,999,169 + +1.4 4,999,169 + +0.1 4,999,170 - -0.1 4,999,170 - +0.8 4,999,170 - -0.7 4,999,170 - -1.1 4,999,170 - +0.1 4,999,294 + AO353_22815 0.40 -0.5 4,999,533 + +0.9 4,999,613 + -1.1 4,999,614 - -2.0 4,999,664 - -0.5 4,999,720 + -1.3 4,999,720 + +1.4 4,999,720 + -1.0 4,999,720 + -0.7 4,999,720 + +1.8 4,999,720 + -1.7 4,999,720 + -0.4 4,999,721 - -1.1 4,999,721 - -0.7 4,999,721 - +2.7 4,999,721 - +0.8 4,999,721 - -1.2 4,999,724 + -3.2 4,999,738 + +1.0 4,999,738 + -0.1 4,999,804 + +0.7 4,999,805 - -1.2 4,999,805 - -2.1 4,999,985 + -0.6 4,999,985 + +1.1 4,999,986 - -2.1 4,999,986 - -1.9 5,000,003 + +0.1 5,000,003 + -1.8 5,000,003 + +1.5
Or see this region's nucleotide sequence