Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17295

Experiment: Lomefloxacin 0.001 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lomefloxacin 0.001 mM
3,821,599	-		AO353_17290	0.43	-1.4
3,821,884	+		AO353_17290	0.63	-0.8
3,821,885	-		AO353_17290	0.63	-1.3
3,821,885	-		AO353_17290	0.63	-1.8
3,821,885	-		AO353_17290	0.63	-0.8
3,821,885	-		AO353_17290	0.63	-1.3
3,821,950	+		AO353_17290	0.67	+0.1
3,821,951	-		AO353_17290	0.67	-0.8
3,822,034	+		AO353_17290	0.73	+0.4
3,822,034	+		AO353_17290	0.73	-1.0
3,822,034	+		AO353_17290	0.73	-2.1
3,822,035	-		AO353_17290	0.73	-2.4
3,822,411	+				-0.8
3,822,411	+				-0.6
3,822,439	+				-1.0
3,822,439	+				-1.9
3,822,440	-				-1.2
3,822,440	-				-1.9
3,822,449	+				+0.4
3,822,450	-				-1.7
3,822,450	-				-1.4
3,822,450	-				-0.4
3,822,537	-				-2.3
3,822,804	+		AO353_17295	0.12	-0.8
3,822,804	+		AO353_17295	0.12	-1.0
3,822,805	-		AO353_17295	0.12	-1.0
3,822,805	-		AO353_17295	0.12	+0.8
3,822,805	-		AO353_17295	0.12	-0.4
3,822,805	-		AO353_17295	0.12	-0.8
3,822,805	-		AO353_17295	0.12	-0.6
3,822,866	+		AO353_17295	0.14	-1.2
3,822,866	+		AO353_17295	0.14	-0.7
3,822,906	+		AO353_17295	0.15	-1.2
3,822,906	+		AO353_17295	0.15	-0.2
3,822,907	-		AO353_17295	0.15	-0.5
3,822,951	+		AO353_17295	0.17	-1.9
3,822,951	+		AO353_17295	0.17	-1.7
3,822,990	+		AO353_17295	0.18	-1.4
3,822,990	+		AO353_17295	0.18	+0.0
3,822,990	+		AO353_17295	0.18	-2.7
3,822,990	+		AO353_17295	0.18	+0.8
3,822,991	-		AO353_17295	0.18	-3.0
3,822,991	-		AO353_17295	0.18	-1.4
3,823,013	-		AO353_17295	0.19	-0.8
3,823,116	-		AO353_17295	0.22	-1.1
3,823,116	-		AO353_17295	0.22	-2.4
3,823,116	-		AO353_17295	0.22	-2.4
3,823,125	+		AO353_17295	0.22	+2.1
3,823,125	+		AO353_17295	0.22	-2.1
3,823,126	-		AO353_17295	0.22	-0.9
3,823,149	+		AO353_17295	0.23	-1.7
3,823,149	+		AO353_17295	0.23	-1.7
3,823,150	-		AO353_17295	0.23	-1.1
3,823,150	-		AO353_17295	0.23	-2.5
3,823,150	-		AO353_17295	0.23	-3.2
3,823,208	+		AO353_17295	0.25	-2.8
3,823,208	+		AO353_17295	0.25	+1.1
3,823,208	+		AO353_17295	0.25	-0.6
3,823,208	+		AO353_17295	0.25	-1.9
3,823,208	+		AO353_17295	0.25	-1.2
3,823,208	+		AO353_17295	0.25	-3.4
3,823,208	+		AO353_17295	0.25	-2.8
3,823,208	+		AO353_17295	0.25	-0.2
3,823,209	-		AO353_17295	0.25	-1.4
3,823,209	-		AO353_17295	0.25	-0.7
3,823,209	-		AO353_17295	0.25	-2.0
3,823,209	-		AO353_17295	0.25	-1.4
3,823,209	-		AO353_17295	0.25	+0.8
3,823,209	-		AO353_17295	0.25	-1.9
3,823,209	-		AO353_17295	0.25	+0.8
3,823,209	-		AO353_17295	0.25	-3.0
3,823,209	-		AO353_17295	0.25	-1.6
3,823,212	+		AO353_17295	0.25	-2.8
3,823,212	+		AO353_17295	0.25	-2.2
3,823,213	-		AO353_17295	0.25	-0.2
3,823,213	-		AO353_17295	0.25	-3.4
3,823,213	-		AO353_17295	0.25	-1.5
3,823,262	+		AO353_17295	0.27	-0.7
3,823,262	+		AO353_17295	0.27	-1.4
3,823,262	+		AO353_17295	0.27	-2.1
3,823,262	+		AO353_17295	0.27	-0.5
3,823,262	+		AO353_17295	0.27	-1.6
3,823,262	+		AO353_17295	0.27	-2.0
3,823,262	+		AO353_17295	0.27	-2.8
3,823,262	+		AO353_17295	0.27	-1.7
3,823,262	+		AO353_17295	0.27	-1.5
3,823,262	+		AO353_17295	0.27	-3.7
3,823,262	+		AO353_17295	0.27	+0.3
3,823,262	+		AO353_17295	0.27	-2.0
3,823,263	-		AO353_17295	0.27	-1.1
3,823,263	-		AO353_17295	0.27	-1.4
3,823,263	-		AO353_17295	0.27	-2.0
3,823,263	-		AO353_17295	0.27	-0.8
3,823,263	-		AO353_17295	0.27	-1.2
3,823,263	-		AO353_17295	0.27	-2.2
3,823,263	-		AO353_17295	0.27	-0.2
3,823,263	-		AO353_17295	0.27	-2.6
3,823,263	-		AO353_17295	0.27	-2.0
3,823,263	-		AO353_17295	0.27	-1.2
3,823,266	+		AO353_17295	0.27	-1.8
3,823,267	-		AO353_17295	0.27	-0.5
3,823,267	-		AO353_17295	0.27	-1.8
3,823,267	-		AO353_17295	0.27	-1.6
3,823,308	+		AO353_17295	0.28	-2.2
3,823,308	+		AO353_17295	0.28	-2.4
3,823,308	+		AO353_17295	0.28	-0.2
3,823,308	+		AO353_17295	0.28	-4.0
3,823,308	+		AO353_17295	0.28	-2.7
3,823,309	-		AO353_17295	0.28	-1.6
3,823,309	-		AO353_17295	0.28	-1.5
3,823,309	-		AO353_17295	0.28	-0.2
3,823,309	-		AO353_17295	0.28	+1.5
3,823,309	-		AO353_17295	0.28	-0.7
3,823,309	-		AO353_17295	0.28	-1.0
3,823,309	-		AO353_17295	0.28	+0.0
3,823,309	-		AO353_17295	0.28	-1.7
3,823,309	-		AO353_17295	0.28	-2.6
3,823,309	-		AO353_17295	0.28	-0.8
3,823,312	+		AO353_17295	0.28	-1.4
3,823,313	-		AO353_17295	0.28	-1.1
3,823,313	-		AO353_17295	0.28	-3.7
3,823,401	+		AO353_17295	0.31	-1.1
3,823,401	+		AO353_17295	0.31	-0.7
3,823,843	+		AO353_17295	0.45	-0.7
3,823,843	+		AO353_17295	0.45	+0.1
3,823,844	-		AO353_17295	0.45	-1.9
3,823,844	-		AO353_17295	0.45	-1.7
3,823,877	+		AO353_17295	0.46	-1.2
3,823,877	+		AO353_17295	0.46	-1.0
3,823,877	+		AO353_17295	0.46	-3.1
3,823,878	-		AO353_17295	0.46	-1.0
3,823,878	-		AO353_17295	0.46	+0.8
3,823,878	-		AO353_17295	0.46	+0.0
3,823,878	-		AO353_17295	0.46	-2.2
3,823,878	-		AO353_17295	0.46	-1.2
3,823,956	+		AO353_17295	0.48	-2.9
3,823,956	+		AO353_17295	0.48	-1.2
3,823,956	+		AO353_17295	0.48	-2.0
3,823,957	-		AO353_17295	0.48	-1.0
3,823,957	-		AO353_17295	0.48	-1.7
3,823,957	-		AO353_17295	0.48	+0.3
3,823,957	-		AO353_17295	0.48	-0.5
3,823,968	+		AO353_17295	0.49	-0.7
3,823,968	+		AO353_17295	0.49	-1.4
3,824,011	-		AO353_17295	0.50	-3.5
3,824,011	-		AO353_17295	0.50	-0.8
3,824,011	-		AO353_17295	0.50	-2.2
3,824,011	-		AO353_17295	0.50	-1.7
3,824,011	-		AO353_17295	0.50	-3.1
3,824,011	-		AO353_17295	0.50	-1.0
3,824,018	+		AO353_17295	0.50	-1.0
3,824,018	+		AO353_17295	0.50	-2.1
3,824,018	+		AO353_17295	0.50	+0.8
3,824,018	+		AO353_17295	0.50	+0.0
3,824,018	+		AO353_17295	0.50	-3.2
3,824,019	-		AO353_17295	0.50	-1.8
3,824,019	-		AO353_17295	0.50	-1.5
3,824,019	-		AO353_17295	0.50	-2.7
3,824,019	-		AO353_17295	0.50	-1.2
3,824,019	-		AO353_17295	0.50	-3.0
3,824,024	-		AO353_17295	0.51	-3.8
3,824,190	+		AO353_17295	0.56	-2.0
3,824,190	+		AO353_17295	0.56	-0.8
3,824,191	-		AO353_17295	0.56	-1.7
3,824,191	-		AO353_17295	0.56	-0.5
3,824,191	-		AO353_17295	0.56	-2.4
3,824,191	-		AO353_17295	0.56	-1.5
3,824,407	+		AO353_17295	0.63	-2.2
3,824,407	+		AO353_17295	0.63	-0.8
3,824,407	+		AO353_17295	0.63	-1.0
3,824,407	+		AO353_17295	0.63	-1.7
3,824,408	-		AO353_17295	0.63	-1.5
3,824,408	-		AO353_17295	0.63	-0.7
3,824,408	-		AO353_17295	0.63	-1.4
3,824,408	-		AO353_17295	0.63	-1.4
3,824,408	-		AO353_17295	0.63	-1.5
3,824,408	-		AO353_17295	0.63	-2.8
3,824,408	-		AO353_17295	0.63	-3.1
3,824,408	-		AO353_17295	0.63	-3.3
3,824,408	-		AO353_17295	0.63	-0.7
3,824,408	-		AO353_17295	0.63	-0.5
3,824,766	+		AO353_17295	0.74	-4.1
3,824,766	+		AO353_17295	0.74	-0.5
3,824,767	-		AO353_17295	0.74	-0.8
3,824,767	-		AO353_17295	0.74	-1.5
3,825,034	+		AO353_17295	0.82	-1.1
3,825,034	+		AO353_17295	0.82	-0.1
3,825,034	+		AO353_17295	0.82	-0.5
3,825,034	+		AO353_17295	0.82	-3.6
3,825,034	+		AO353_17295	0.82	-1.1
3,825,034	+		AO353_17295	0.82	-2.0
3,825,034	+		AO353_17295	0.82	-1.0
3,825,034	+		AO353_17295	0.82	-2.2
3,825,035	-		AO353_17295	0.82	-1.4
3,825,035	-		AO353_17295	0.82	-1.4
3,825,035	-		AO353_17295	0.82	-0.2
3,825,035	-		AO353_17295	0.82	+0.5
3,825,035	-		AO353_17295	0.82	-3.0
3,825,035	-		AO353_17295	0.82	-2.5
3,825,035	-		AO353_17295	0.82	-1.4
3,825,035	-		AO353_17295	0.82	-0.7
3,825,120	+		AO353_17295	0.85	+0.4
3,825,120	+		AO353_17295	0.85	-1.6
3,825,120	+		AO353_17295	0.85	-1.4
3,825,120	+		AO353_17295	0.85	-0.4
3,825,120	+		AO353_17295	0.85	-0.4
3,825,120	+		AO353_17295	0.85	-1.1
3,825,120	+		AO353_17295	0.85	-3.1
3,825,120	+		AO353_17295	0.85	-1.0
3,825,121	-		AO353_17295	0.85	-0.8
3,825,121	-		AO353_17295	0.85	-2.0
3,825,121	-		AO353_17295	0.85	-2.0
3,825,121	-		AO353_17295	0.85	-1.0
3,825,121	-		AO353_17295	0.85	-3.3
3,825,121	-		AO353_17295	0.85	+0.4
3,825,121	-		AO353_17295	0.85	-1.6
3,825,121	-		AO353_17295	0.85	-2.5
3,825,319	+				+0.4
3,825,343	+				-2.0
3,825,343	+				-0.2
3,825,343	+				-2.2
3,825,360	+				-1.3
3,825,360	+				-2.0
3,825,360	+				-2.0
3,825,360	+				-0.4
3,825,360	+				-2.4
3,825,360	+				-0.4
3,825,360	+				-0.2
3,825,360	+				+0.4
3,825,361	-				-1.0
3,825,361	-				-2.7
3,825,361	-				+0.8
3,825,361	-				-2.3
3,825,361	-				-2.5
3,825,361	-				-3.2
3,825,361	-				-0.6
3,825,361	-				-1.2
3,825,361	-				-1.2
3,825,444	+				+0.4
3,825,445	-				-0.6
3,825,445	-				-1.9
3,825,445	-				-1.1
3,825,445	-				-1.1
3,825,515	+				-0.8
3,825,548	+				-0.2
3,825,548	+				-1.0
3,825,548	+				-1.5
3,825,548	+				-3.0
3,825,548	+				-0.1
3,825,548	+				-1.7
3,825,549	-				-1.5
3,825,549	-				+0.0
3,825,594	+				-1.1
3,825,594	+				-1.6
3,825,594	+				-1.8
3,825,594	+				-2.0
3,825,595	-				-0.8
3,825,595	-				+0.4
3,825,622	+				-1.7
3,825,622	+				-2.0
3,825,622	+				-1.2
3,825,622	+				+0.8
3,825,683	+				-1.1
3,825,683	+				-0.2
3,825,683	+				-1.2
3,825,683	+				-0.4
3,826,038	+		AO353_17300	0.38	-0.2
3,826,038	+		AO353_17300	0.38	-1.3
3,826,038	+		AO353_17300	0.38	-1.7
3,826,039	-		AO353_17300	0.39	+0.2
3,826,039	-		AO353_17300	0.39	-1.1
3,826,039	-		AO353_17300	0.39	-2.7
3,826,164	+		AO353_17300	0.49	-3.0
3,826,164	+		AO353_17300	0.49	-1.2
3,826,164	+		AO353_17300	0.49	-1.9
3,826,164	+		AO353_17300	0.49	-0.2
3,826,164	+		AO353_17300	0.49	-0.6
3,826,165	-		AO353_17300	0.49	-1.6
3,826,165	-		AO353_17300	0.49	-1.0
3,826,165	-		AO353_17300	0.49	-1.1
3,826,165	-		AO353_17300	0.49	-1.7
3,826,165	-		AO353_17300	0.49	-1.6
3,826,272	+		AO353_17300	0.59	-1.4
3,826,273	-		AO353_17300	0.59	-1.0
3,826,284	+		AO353_17300	0.60	-1.1
3,826,354	-		AO353_17300	0.66	-2.3
3,826,354	-		AO353_17300	0.66	+0.0
3,826,368	-		AO353_17300	0.67	-3.3
3,826,395	+		AO353_17300	0.69	-2.1
3,826,395	+		AO353_17300	0.69	+0.4
3,826,458	+		AO353_17300	0.75	-0.2
3,826,458	+		AO353_17300	0.75	-0.6
3,826,458	+		AO353_17300	0.75	-1.2
3,826,459	-		AO353_17300	0.75	+0.0
3,826,459	-		AO353_17300	0.75	-1.2
3,826,459	-		AO353_17300	0.75	-1.1