Experiment: Lomefloxacin 0.001 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_17030 and AO353_17035 are separated by 143 nucleotides AO353_17035 and AO353_17040 are separated by 39 nucleotides AO353_17040 and AO353_17045 are separated by 5 nucleotides
AO353_17030: AO353_17030 - serine hydrolase, at 3,765,960 to 3,767,105
_17030
AO353_17035: AO353_17035 - hypothetical protein, at 3,767,249 to 3,768,274
_17035
AO353_17040: AO353_17040 - pyridoxine 5'-phosphate oxidase, at 3,768,314 to 3,768,961
_17040
AO353_17045: AO353_17045 - 30S ribosomal protein S3, at 3,768,967 to 3,769,203
_17045
Position (kb)
3767
3768
3769 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3766.353 kb on + strand, within AO353_17030 at 3766.353 kb on + strand, within AO353_17030 at 3766.353 kb on + strand, within AO353_17030 at 3766.353 kb on + strand, within AO353_17030 at 3766.353 kb on + strand, within AO353_17030 at 3766.353 kb on + strand, within AO353_17030 at 3766.353 kb on + strand, within AO353_17030 at 3766.353 kb on + strand, within AO353_17030 at 3766.353 kb on + strand, within AO353_17030 at 3766.353 kb on + strand, within AO353_17030 at 3766.354 kb on - strand, within AO353_17030 at 3766.354 kb on - strand, within AO353_17030 at 3766.354 kb on - strand, within AO353_17030 at 3766.354 kb on - strand, within AO353_17030 at 3766.354 kb on - strand, within AO353_17030 at 3766.354 kb on - strand, within AO353_17030 at 3766.354 kb on - strand, within AO353_17030 at 3766.354 kb on - strand, within AO353_17030 at 3766.354 kb on - strand, within AO353_17030 at 3766.354 kb on - strand, within AO353_17030 at 3766.354 kb on - strand, within AO353_17030 at 3766.354 kb on - strand, within AO353_17030 at 3766.354 kb on - strand, within AO353_17030 at 3766.354 kb on - strand, within AO353_17030 at 3766.354 kb on - strand, within AO353_17030 at 3766.355 kb on + strand, within AO353_17030 at 3766.355 kb on + strand, within AO353_17030 at 3766.356 kb on - strand, within AO353_17030 at 3766.356 kb on - strand, within AO353_17030 at 3766.356 kb on - strand, within AO353_17030 at 3766.440 kb on + strand, within AO353_17030 at 3766.440 kb on + strand, within AO353_17030 at 3766.440 kb on + strand, within AO353_17030 at 3766.440 kb on + strand, within AO353_17030 at 3766.440 kb on + strand, within AO353_17030 at 3766.440 kb on + strand, within AO353_17030 at 3766.440 kb on + strand, within AO353_17030 at 3766.441 kb on - strand, within AO353_17030 at 3766.441 kb on - strand, within AO353_17030 at 3766.441 kb on - strand, within AO353_17030 at 3766.441 kb on - strand, within AO353_17030 at 3766.441 kb on - strand, within AO353_17030 at 3766.441 kb on - strand, within AO353_17030 at 3766.441 kb on - strand, within AO353_17030 at 3766.727 kb on + strand, within AO353_17030 at 3766.728 kb on - strand, within AO353_17030 at 3766.728 kb on - strand, within AO353_17030 at 3766.782 kb on + strand, within AO353_17030 at 3766.782 kb on + strand, within AO353_17030 at 3766.782 kb on + strand, within AO353_17030 at 3766.782 kb on + strand, within AO353_17030 at 3766.782 kb on + strand, within AO353_17030 at 3766.783 kb on - strand, within AO353_17030 at 3766.783 kb on - strand, within AO353_17030 at 3766.783 kb on - strand, within AO353_17030 at 3766.783 kb on - strand, within AO353_17030 at 3766.783 kb on - strand, within AO353_17030 at 3766.783 kb on - strand, within AO353_17030 at 3766.870 kb on + strand, within AO353_17030 at 3766.901 kb on + strand, within AO353_17030 at 3766.901 kb on + strand, within AO353_17030 at 3766.901 kb on + strand, within AO353_17030 at 3766.901 kb on + strand, within AO353_17030 at 3766.901 kb on + strand, within AO353_17030 at 3766.901 kb on + strand, within AO353_17030 at 3766.901 kb on + strand, within AO353_17030 at 3766.901 kb on + strand, within AO353_17030 at 3766.901 kb on + strand, within AO353_17030 at 3766.901 kb on + strand, within AO353_17030 at 3766.901 kb on + strand, within AO353_17030 at 3766.901 kb on + strand, within AO353_17030 at 3766.901 kb on + strand, within AO353_17030 at 3766.901 kb on + strand, within AO353_17030 at 3766.902 kb on - strand, within AO353_17030 at 3766.902 kb on - strand, within AO353_17030 at 3766.902 kb on - strand, within AO353_17030 at 3766.902 kb on - strand, within AO353_17030 at 3766.902 kb on - strand, within AO353_17030 at 3766.902 kb on - strand, within AO353_17030 at 3766.902 kb on - strand, within AO353_17030 at 3766.902 kb on - strand, within AO353_17030 at 3766.902 kb on - strand, within AO353_17030 at 3766.902 kb on - strand, within AO353_17030 at 3766.902 kb on - strand, within AO353_17030 at 3766.902 kb on - strand, within AO353_17030 at 3766.921 kb on + strand, within AO353_17030 at 3766.921 kb on + strand, within AO353_17030 at 3766.922 kb on - strand, within AO353_17030 at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.046 kb on + strand at 3767.047 kb on - strand at 3767.047 kb on - strand at 3767.047 kb on - strand at 3767.047 kb on - strand at 3767.047 kb on - strand at 3767.047 kb on - strand at 3767.047 kb on - strand at 3767.047 kb on - strand at 3767.047 kb on - strand at 3767.047 kb on - strand at 3767.047 kb on - strand at 3767.047 kb on - strand at 3767.047 kb on - strand at 3767.047 kb on - strand at 3767.047 kb on - strand at 3767.047 kb on - strand at 3767.047 kb on - strand at 3767.110 kb on + strand at 3767.111 kb on - strand at 3767.175 kb on + strand at 3767.175 kb on + strand at 3767.175 kb on + strand at 3767.175 kb on + strand at 3767.175 kb on + strand at 3767.175 kb on + strand at 3767.175 kb on + strand at 3767.175 kb on + strand at 3767.176 kb on - strand at 3767.176 kb on - strand at 3767.176 kb on - strand at 3767.176 kb on - strand at 3767.176 kb on - strand at 3767.176 kb on - strand at 3767.176 kb on - strand at 3767.176 kb on - strand at 3767.176 kb on - strand at 3767.176 kb on - strand at 3767.176 kb on - strand at 3767.177 kb on + strand at 3767.177 kb on + strand at 3767.177 kb on + strand at 3767.177 kb on + strand at 3767.177 kb on + strand at 3767.178 kb on - strand at 3767.178 kb on - strand at 3767.178 kb on - strand at 3767.178 kb on - strand at 3767.197 kb on + strand at 3767.200 kb on - strand at 3767.200 kb on - strand at 3767.200 kb on - strand at 3767.226 kb on + strand at 3767.226 kb on + strand at 3767.226 kb on + strand at 3767.226 kb on + strand at 3767.226 kb on + strand at 3767.226 kb on + strand at 3767.227 kb on - strand at 3767.227 kb on - strand at 3767.227 kb on - strand at 3767.268 kb on + strand at 3767.269 kb on - strand at 3767.618 kb on + strand, within AO353_17035 at 3767.618 kb on + strand, within AO353_17035 at 3767.619 kb on - strand, within AO353_17035 at 3767.619 kb on - strand, within AO353_17035 at 3767.656 kb on + strand, within AO353_17035 at 3767.694 kb on + strand, within AO353_17035 at 3767.695 kb on - strand, within AO353_17035 at 3767.814 kb on + strand, within AO353_17035 at 3767.815 kb on - strand, within AO353_17035 at 3767.815 kb on - strand, within AO353_17035 at 3768.056 kb on + strand, within AO353_17035 at 3768.056 kb on + strand, within AO353_17035 at 3768.056 kb on + strand, within AO353_17035 at 3768.056 kb on + strand, within AO353_17035 at 3768.056 kb on + strand, within AO353_17035 at 3768.056 kb on + strand, within AO353_17035 at 3768.056 kb on + strand, within AO353_17035 at 3768.057 kb on - strand, within AO353_17035 at 3768.057 kb on - strand, within AO353_17035 at 3768.057 kb on - strand, within AO353_17035 at 3768.272 kb on + strand at 3768.313 kb on + strand at 3768.980 kb on + strand at 3768.980 kb on + strand at 3768.980 kb on + strand at 3769.030 kb on - strand, within AO353_17045 at 3769.030 kb on - strand, within AO353_17045 at 3769.030 kb on - strand, within AO353_17045 at 3769.142 kb on + strand, within AO353_17045 at 3769.142 kb on + strand, within AO353_17045 at 3769.142 kb on + strand, within AO353_17045 at 3769.142 kb on + strand, within AO353_17045 at 3769.142 kb on + strand, within AO353_17045 at 3769.142 kb on + strand, within AO353_17045 at 3769.142 kb on + strand, within AO353_17045 at 3769.142 kb on + strand, within AO353_17045 at 3769.142 kb on + strand, within AO353_17045 at 3769.143 kb on - strand, within AO353_17045 at 3769.143 kb on - strand, within AO353_17045 at 3769.143 kb on - strand, within AO353_17045 at 3769.143 kb on - strand, within AO353_17045 at 3769.160 kb on + strand, within AO353_17045 at 3769.160 kb on + strand, within AO353_17045 at 3769.160 kb on + strand, within AO353_17045 at 3769.160 kb on + strand, within AO353_17045 at 3769.160 kb on + strand, within AO353_17045 at 3769.161 kb on - strand, within AO353_17045 at 3769.161 kb on - strand, within AO353_17045 at 3769.161 kb on - strand, within AO353_17045 at 3769.196 kb on + strand at 3769.196 kb on + strand at 3769.196 kb on + strand at 3769.196 kb on + strand at 3769.196 kb on + strand at 3769.197 kb on - strand at 3769.197 kb on - strand at 3769.197 kb on - strand at 3769.197 kb on - strand at 3769.197 kb on - strand at 3769.197 kb on - strand at 3769.197 kb on - strand at 3769.197 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Lomefloxacin 0.001 mM remove 3,766,353 + AO353_17030 0.34 -0.4 3,766,353 + AO353_17030 0.34 -1.2 3,766,353 + AO353_17030 0.34 -1.3 3,766,353 + AO353_17030 0.34 -2.1 3,766,353 + AO353_17030 0.34 -0.2 3,766,353 + AO353_17030 0.34 -0.6 3,766,353 + AO353_17030 0.34 +1.1 3,766,353 + AO353_17030 0.34 -1.4 3,766,353 + AO353_17030 0.34 +1.8 3,766,353 + AO353_17030 0.34 -1.5 3,766,354 - AO353_17030 0.34 +1.0 3,766,354 - AO353_17030 0.34 +0.7 3,766,354 - AO353_17030 0.34 -1.0 3,766,354 - AO353_17030 0.34 -1.0 3,766,354 - AO353_17030 0.34 +0.4 3,766,354 - AO353_17030 0.34 -1.5 3,766,354 - AO353_17030 0.34 -0.3 3,766,354 - AO353_17030 0.34 -2.2 3,766,354 - AO353_17030 0.34 -1.2 3,766,354 - AO353_17030 0.34 -1.1 3,766,354 - AO353_17030 0.34 -0.4 3,766,354 - AO353_17030 0.34 +0.8 3,766,354 - AO353_17030 0.34 +1.6 3,766,354 - AO353_17030 0.34 -2.5 3,766,354 - AO353_17030 0.34 +0.0 3,766,355 + AO353_17030 0.34 -0.5 3,766,355 + AO353_17030 0.34 -0.8 3,766,356 - AO353_17030 0.35 -2.0 3,766,356 - AO353_17030 0.35 -2.0 3,766,356 - AO353_17030 0.35 +1.2 3,766,440 + AO353_17030 0.42 -1.7 3,766,440 + AO353_17030 0.42 -1.2 3,766,440 + AO353_17030 0.42 +1.2 3,766,440 + AO353_17030 0.42 -0.4 3,766,440 + AO353_17030 0.42 +1.8 3,766,440 + AO353_17030 0.42 -1.1 3,766,440 + AO353_17030 0.42 +0.1 3,766,441 - AO353_17030 0.42 -1.1 3,766,441 - AO353_17030 0.42 -1.7 3,766,441 - AO353_17030 0.42 -2.0 3,766,441 - AO353_17030 0.42 -1.2 3,766,441 - AO353_17030 0.42 -2.3 3,766,441 - AO353_17030 0.42 -2.4 3,766,441 - AO353_17030 0.42 +1.0 3,766,727 + AO353_17030 0.67 +0.3 3,766,728 - AO353_17030 0.67 -1.0 3,766,728 - AO353_17030 0.67 -0.8 3,766,782 + AO353_17030 0.72 -0.2 3,766,782 + AO353_17030 0.72 +0.9 3,766,782 + AO353_17030 0.72 -0.4 3,766,782 + AO353_17030 0.72 -0.6 3,766,782 + AO353_17030 0.72 +2.4 3,766,783 - AO353_17030 0.72 -0.2 3,766,783 - AO353_17030 0.72 +0.4 3,766,783 - AO353_17030 0.72 -1.1 3,766,783 - AO353_17030 0.72 -1.1 3,766,783 - AO353_17030 0.72 -0.8 3,766,783 - AO353_17030 0.72 -1.6 3,766,870 + AO353_17030 0.79 +0.4 3,766,901 + AO353_17030 0.82 -0.8 3,766,901 + AO353_17030 0.82 -1.3 3,766,901 + AO353_17030 0.82 -1.2 3,766,901 + AO353_17030 0.82 -0.4 3,766,901 + AO353_17030 0.82 -1.0 3,766,901 + AO353_17030 0.82 -2.2 3,766,901 + AO353_17030 0.82 +0.2 3,766,901 + AO353_17030 0.82 -0.9 3,766,901 + AO353_17030 0.82 +0.1 3,766,901 + AO353_17030 0.82 -1.9 3,766,901 + AO353_17030 0.82 -1.4 3,766,901 + AO353_17030 0.82 -0.6 3,766,901 + AO353_17030 0.82 -1.8 3,766,901 + AO353_17030 0.82 -1.5 3,766,902 - AO353_17030 0.82 -0.7 3,766,902 - AO353_17030 0.82 +2.4 3,766,902 - AO353_17030 0.82 -2.0 3,766,902 - AO353_17030 0.82 -1.8 3,766,902 - AO353_17030 0.82 -2.3 3,766,902 - AO353_17030 0.82 +1.4 3,766,902 - AO353_17030 0.82 -1.1 3,766,902 - AO353_17030 0.82 -2.1 3,766,902 - AO353_17030 0.82 -1.8 3,766,902 - AO353_17030 0.82 -0.3 3,766,902 - AO353_17030 0.82 -1.0 3,766,902 - AO353_17030 0.82 -0.4 3,766,921 + AO353_17030 0.84 -1.9 3,766,921 + AO353_17030 0.84 +0.0 3,766,922 - AO353_17030 0.84 -2.1 3,767,046 + +1.4 3,767,046 + -0.8 3,767,046 + +0.4 3,767,046 + -1.5 3,767,046 + +0.4 3,767,046 + -1.5 3,767,046 + -1.6 3,767,046 + -1.3 3,767,046 + -1.3 3,767,046 + -0.3 3,767,046 + +0.0 3,767,046 + -1.0 3,767,046 + +0.2 3,767,046 + +0.1 3,767,046 + -0.9 3,767,046 + -0.0 3,767,046 + +0.2 3,767,046 + -0.7 3,767,046 + -0.8 3,767,046 + -0.4 3,767,046 + -0.8 3,767,047 - -1.0 3,767,047 - -1.1 3,767,047 - -1.3 3,767,047 - -1.3 3,767,047 - +0.4 3,767,047 - -1.1 3,767,047 - +0.8 3,767,047 - -1.2 3,767,047 - -1.3 3,767,047 - -2.2 3,767,047 - -1.3 3,767,047 - -0.6 3,767,047 - +0.0 3,767,047 - +0.2 3,767,047 - -0.4 3,767,047 - -1.5 3,767,047 - -2.3 3,767,110 + +1.3 3,767,111 - -1.4 3,767,175 + -1.3 3,767,175 + -0.0 3,767,175 + +1.8 3,767,175 + +1.9 3,767,175 + -0.6 3,767,175 + -1.9 3,767,175 + -1.5 3,767,175 + +1.9 3,767,176 - -1.2 3,767,176 - -0.6 3,767,176 - -1.7 3,767,176 - -0.8 3,767,176 - -2.0 3,767,176 - -1.5 3,767,176 - -0.6 3,767,176 - -1.9 3,767,176 - -2.5 3,767,176 - -0.4 3,767,176 - -1.3 3,767,177 + -0.9 3,767,177 + -1.1 3,767,177 + -1.9 3,767,177 + +0.9 3,767,177 + -0.1 3,767,178 - -1.8 3,767,178 - +0.4 3,767,178 - -1.0 3,767,178 - -2.5 3,767,197 + -0.0 3,767,200 - -0.8 3,767,200 - -0.6 3,767,200 - -1.0 3,767,226 + +1.2 3,767,226 + +0.4 3,767,226 + -1.6 3,767,226 + -0.2 3,767,226 + -1.1 3,767,226 + -0.2 3,767,227 - -1.4 3,767,227 - -0.5 3,767,227 - -2.7 3,767,268 + -0.1 3,767,269 - -1.5 3,767,618 + AO353_17035 0.36 -0.4 3,767,618 + AO353_17035 0.36 -1.3 3,767,619 - AO353_17035 0.36 -1.1 3,767,619 - AO353_17035 0.36 +0.0 3,767,656 + AO353_17035 0.40 +0.0 3,767,694 + AO353_17035 0.43 -2.0 3,767,695 - AO353_17035 0.43 -0.6 3,767,814 + AO353_17035 0.55 +0.4 3,767,815 - AO353_17035 0.55 +0.2 3,767,815 - AO353_17035 0.55 -0.6 3,768,056 + AO353_17035 0.79 -0.1 3,768,056 + AO353_17035 0.79 -2.0 3,768,056 + AO353_17035 0.79 -1.8 3,768,056 + AO353_17035 0.79 -0.6 3,768,056 + AO353_17035 0.79 -2.3 3,768,056 + AO353_17035 0.79 +0.8 3,768,056 + AO353_17035 0.79 +0.3 3,768,057 - AO353_17035 0.79 -1.5 3,768,057 - AO353_17035 0.79 +1.0 3,768,057 - AO353_17035 0.79 -1.4 3,768,272 + +1.0 3,768,313 + -1.2 3,768,980 + -1.1 3,768,980 + +0.0 3,768,980 + -0.4 3,769,030 - AO353_17045 0.27 +0.0 3,769,030 - AO353_17045 0.27 -1.0 3,769,030 - AO353_17045 0.27 +0.0 3,769,142 + AO353_17045 0.74 -1.2 3,769,142 + AO353_17045 0.74 -0.2 3,769,142 + AO353_17045 0.74 +0.2 3,769,142 + AO353_17045 0.74 -0.6 3,769,142 + AO353_17045 0.74 -2.4 3,769,142 + AO353_17045 0.74 -0.4 3,769,142 + AO353_17045 0.74 +1.1 3,769,142 + AO353_17045 0.74 -0.2 3,769,142 + AO353_17045 0.74 -2.2 3,769,143 - AO353_17045 0.74 -1.2 3,769,143 - AO353_17045 0.74 -0.2 3,769,143 - AO353_17045 0.74 -0.3 3,769,143 - AO353_17045 0.74 -0.3 3,769,160 + AO353_17045 0.81 -1.8 3,769,160 + AO353_17045 0.81 +1.6 3,769,160 + AO353_17045 0.81 +0.4 3,769,160 + AO353_17045 0.81 -0.2 3,769,160 + AO353_17045 0.81 +0.3 3,769,161 - AO353_17045 0.82 +2.6 3,769,161 - AO353_17045 0.82 +0.8 3,769,161 - AO353_17045 0.82 -2.0 3,769,196 + -0.9 3,769,196 + -0.2 3,769,196 + +0.0 3,769,196 + -0.8 3,769,196 + +1.0 3,769,197 - -0.4 3,769,197 - +0.4 3,769,197 - +0.8 3,769,197 - +0.7 3,769,197 - +0.6 3,769,197 - -0.6 3,769,197 - -0.4 3,769,197 - -0.7
Or see this region's nucleotide sequence