Experiment: Lomefloxacin 0.001 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_07370 and AO353_07375 are separated by 199 nucleotides AO353_07375 and AO353_07380 are separated by 489 nucleotides AO353_07380 and AO353_07385 are separated by 67 nucleotides
AO353_07370: AO353_07370 - tRNA threonylcarbamoyl adenosine modification protein TsaD, at 1,618,530 to 1,619,555
_07370
AO353_07375: AO353_07375 - 30S ribosomal protein S21, at 1,619,755 to 1,619,970
_07375
AO353_07380: AO353_07380 - DNA primase, at 1,620,460 to 1,622,421
_07380
AO353_07385: AO353_07385 - RNA polymerase subunit sigma-70, at 1,622,489 to 1,624,336
_07385
Position (kb)
1620
1621
1622
1623 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1619.599 kb on - strand at 1619.599 kb on - strand at 1620.022 kb on + strand at 1620.022 kb on + strand at 1620.022 kb on + strand at 1620.226 kb on + strand at 1620.226 kb on + strand at 1620.226 kb on + strand at 1620.226 kb on + strand at 1620.226 kb on + strand at 1620.226 kb on + strand at 1620.226 kb on + strand at 1620.226 kb on + strand at 1620.233 kb on + strand at 1620.304 kb on + strand at 1620.304 kb on + strand at 1620.328 kb on + strand at 1620.328 kb on + strand at 1620.328 kb on + strand at 1620.328 kb on + strand at 1620.358 kb on + strand at 1620.358 kb on + strand at 1620.394 kb on + strand at 1620.394 kb on + strand at 1620.394 kb on + strand at 1620.394 kb on + strand at 1620.394 kb on + strand at 1620.394 kb on + strand at 1620.394 kb on + strand at 1620.394 kb on + strand at 1622.375 kb on + strand at 1622.375 kb on + strand at 1622.375 kb on + strand at 1622.427 kb on + strand at 1622.431 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Lomefloxacin 0.001 mM remove 1,619,599 - +2.4 1,619,599 - -0.4 1,620,022 + -0.4 1,620,022 + -1.3 1,620,022 + +1.4 1,620,226 + +0.8 1,620,226 + -0.4 1,620,226 + -0.6 1,620,226 + -1.2 1,620,226 + +1.3 1,620,226 + -1.1 1,620,226 + +0.6 1,620,226 + -1.5 1,620,233 + +1.1 1,620,304 + -1.2 1,620,304 + -1.2 1,620,328 + +0.4 1,620,328 + +1.8 1,620,328 + -0.6 1,620,328 + +1.8 1,620,358 + -0.7 1,620,358 + -2.7 1,620,394 + -0.2 1,620,394 + +0.2 1,620,394 + -2.1 1,620,394 + -1.4 1,620,394 + -0.6 1,620,394 + -1.4 1,620,394 + +0.9 1,620,394 + +0.4 1,622,375 + +1.4 1,622,375 + +0.0 1,622,375 + -0.4 1,622,427 + +0.5 1,622,431 + +0.8
Or see this region's nucleotide sequence