Experiment: Lomefloxacin 0.001 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02665 and AO353_02670 are separated by 232 nucleotides AO353_02670 and AO353_02675 are separated by 35 nucleotides
AO353_02665: AO353_02665 - DnaA regulatory inactivator Hda, at 566,594 to 567,298
_02665
AO353_02670: AO353_02670 - hypothetical protein, at 567,531 to 568,601
_02670
AO353_02675: AO353_02675 - hypothetical protein, at 568,637 to 569,773
_02675
Position (kb) 567
568
569 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 566.595 kb on + strand at 566.595 kb on + strand at 566.595 kb on + strand at 566.596 kb on - strand at 567.357 kb on - strand at 567.357 kb on - strand at 567.357 kb on - strand at 567.452 kb on + strand at 567.452 kb on + strand at 567.452 kb on + strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.474 kb on + strand at 567.475 kb on - strand at 567.475 kb on - strand at 567.556 kb on + strand at 567.556 kb on + strand at 567.556 kb on + strand at 567.556 kb on + strand at 567.557 kb on - strand at 567.557 kb on - strand at 567.557 kb on - strand at 567.557 kb on - strand at 567.557 kb on - strand at 567.573 kb on - strand at 567.574 kb on + strand at 567.576 kb on + strand at 567.577 kb on - strand at 567.862 kb on + strand, within AO353_02670 at 567.862 kb on + strand, within AO353_02670 at 567.862 kb on + strand, within AO353_02670 at 567.862 kb on + strand, within AO353_02670 at 567.862 kb on + strand, within AO353_02670 at 567.863 kb on - strand, within AO353_02670 at 567.863 kb on - strand, within AO353_02670 at 567.863 kb on - strand, within AO353_02670 at 567.863 kb on - strand, within AO353_02670 at 567.943 kb on + strand, within AO353_02670 at 567.943 kb on + strand, within AO353_02670 at 567.944 kb on - strand, within AO353_02670 at 568.029 kb on + strand, within AO353_02670 at 568.029 kb on + strand, within AO353_02670 at 568.030 kb on - strand, within AO353_02670 at 568.102 kb on + strand, within AO353_02670 at 568.102 kb on + strand, within AO353_02670 at 568.103 kb on - strand, within AO353_02670 at 568.273 kb on - strand, within AO353_02670 at 568.273 kb on - strand, within AO353_02670 at 568.273 kb on - strand, within AO353_02670 at 568.273 kb on - strand, within AO353_02670 at 568.339 kb on + strand, within AO353_02670 at 568.339 kb on + strand, within AO353_02670 at 568.339 kb on + strand, within AO353_02670 at 568.339 kb on + strand, within AO353_02670 at 568.339 kb on + strand, within AO353_02670 at 568.340 kb on - strand, within AO353_02670 at 568.340 kb on - strand, within AO353_02670 at 568.340 kb on - strand, within AO353_02670 at 568.340 kb on - strand, within AO353_02670 at 568.419 kb on + strand, within AO353_02670 at 568.490 kb on - strand, within AO353_02670 at 568.490 kb on - strand, within AO353_02670 at 568.490 kb on - strand, within AO353_02670 at 568.490 kb on - strand, within AO353_02670 at 568.497 kb on + strand at 568.498 kb on - strand at 568.498 kb on - strand at 568.520 kb on + strand at 568.520 kb on + strand at 568.520 kb on + strand at 568.520 kb on + strand at 568.520 kb on + strand at 568.520 kb on + strand at 568.520 kb on + strand at 568.521 kb on - strand at 568.521 kb on - strand at 568.521 kb on - strand at 568.540 kb on + strand at 568.540 kb on + strand at 568.540 kb on + strand at 568.540 kb on + strand at 568.540 kb on + strand at 568.540 kb on + strand at 568.540 kb on + strand at 568.541 kb on - strand at 568.541 kb on - strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.638 kb on + strand at 568.806 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.118 kb on + strand, within AO353_02675
Per-strain Table
Position Strand Gene LocusTag Fraction Lomefloxacin 0.001 mM remove 566,595 + +0.8 566,595 + +0.7 566,595 + +2.0 566,596 - -1.6 567,357 - -0.1 567,357 - +1.5 567,357 - +2.2 567,452 + -0.6 567,452 + +1.0 567,452 + -1.3 567,453 - +4.1 567,453 - -0.4 567,453 - -0.8 567,453 - -0.8 567,453 - +0.9 567,453 - -1.4 567,453 - +0.5 567,453 - -1.7 567,453 - -1.5 567,474 + -0.4 567,475 - +0.8 567,475 - -0.5 567,556 + -1.7 567,556 + -0.6 567,556 + -0.4 567,556 + -1.1 567,557 - -1.4 567,557 - -0.4 567,557 - -0.9 567,557 - -0.5 567,557 - -0.6 567,573 - -1.6 567,574 + +0.1 567,576 + -1.6 567,577 - +1.2 567,862 + AO353_02670 0.31 -1.9 567,862 + AO353_02670 0.31 -1.5 567,862 + AO353_02670 0.31 -1.1 567,862 + AO353_02670 0.31 +0.5 567,862 + AO353_02670 0.31 -0.4 567,863 - AO353_02670 0.31 +0.4 567,863 - AO353_02670 0.31 -2.2 567,863 - AO353_02670 0.31 -0.1 567,863 - AO353_02670 0.31 -0.1 567,943 + AO353_02670 0.38 -1.6 567,943 + AO353_02670 0.38 -1.1 567,944 - AO353_02670 0.39 -1.3 568,029 + AO353_02670 0.46 -0.4 568,029 + AO353_02670 0.46 -2.5 568,030 - AO353_02670 0.47 -1.7 568,102 + AO353_02670 0.53 -0.1 568,102 + AO353_02670 0.53 -1.1 568,103 - AO353_02670 0.53 +0.9 568,273 - AO353_02670 0.69 -1.1 568,273 - AO353_02670 0.69 -0.5 568,273 - AO353_02670 0.69 -0.4 568,273 - AO353_02670 0.69 +0.2 568,339 + AO353_02670 0.75 +0.9 568,339 + AO353_02670 0.75 +1.5 568,339 + AO353_02670 0.75 +0.8 568,339 + AO353_02670 0.75 +1.0 568,339 + AO353_02670 0.75 +1.1 568,340 - AO353_02670 0.76 -1.3 568,340 - AO353_02670 0.76 +1.3 568,340 - AO353_02670 0.76 +0.9 568,340 - AO353_02670 0.76 -1.2 568,419 + AO353_02670 0.83 -0.5 568,490 - AO353_02670 0.90 -1.6 568,490 - AO353_02670 0.90 -0.6 568,490 - AO353_02670 0.90 -2.5 568,490 - AO353_02670 0.90 -2.1 568,497 + -0.3 568,498 - -0.4 568,498 - +1.5 568,520 + +0.6 568,520 + -2.0 568,520 + -0.6 568,520 + -2.4 568,520 + +1.5 568,520 + +1.2 568,520 + -1.1 568,521 - +0.2 568,521 - -1.4 568,521 - -1.1 568,540 + -0.4 568,540 + +1.9 568,540 + +0.6 568,540 + -1.4 568,540 + -1.1 568,540 + -0.3 568,540 + +1.6 568,541 - -0.8 568,541 - -1.1 568,618 + -2.9 568,618 + -1.1 568,618 + +1.2 568,618 + +0.5 568,618 + +1.2 568,618 + +0.6 568,618 + -0.5 568,618 + -0.4 568,619 - +0.7 568,619 - -0.7 568,619 - -0.4 568,619 - +0.6 568,619 - -1.5 568,619 - -1.8 568,619 - -0.8 568,619 - -2.2 568,619 - +0.4 568,619 - -0.8 568,620 + -1.1 568,620 + -0.0 568,620 + +1.4 568,620 + -0.0 568,620 + -1.3 568,620 + -1.3 568,620 + -0.4 568,620 + +0.5 568,621 - +0.2 568,621 - +1.3 568,621 - -1.8 568,621 - -1.9 568,621 - +2.2 568,621 - -1.6 568,621 - +0.5 568,621 - -0.0 568,621 - -0.1 568,622 + +1.1 568,622 + -0.1 568,622 + -0.9 568,622 + -0.8 568,622 + +0.5 568,622 + -1.4 568,622 + -1.0 568,622 + -0.9 568,622 + +0.8 568,622 + -0.4 568,622 + -1.0 568,623 - +0.5 568,623 - -1.8 568,623 - +0.5 568,623 - +0.2 568,623 - +0.9 568,623 - -0.8 568,623 - +0.9 568,623 - -0.7 568,623 - +0.6 568,623 - +1.6 568,623 - +0.0 568,623 - -1.5 568,638 + +0.7 568,806 + AO353_02675 0.15 -1.6 569,048 + AO353_02675 0.36 +0.4 569,048 + AO353_02675 0.36 +1.3 569,048 + AO353_02675 0.36 +0.2 569,048 + AO353_02675 0.36 +0.5 569,048 + AO353_02675 0.36 +1.4 569,048 + AO353_02675 0.36 +1.0 569,048 + AO353_02675 0.36 -0.6 569,048 + AO353_02675 0.36 +1.2 569,048 + AO353_02675 0.36 +0.6 569,048 + AO353_02675 0.36 -0.8 569,048 + AO353_02675 0.36 -0.3 569,048 + AO353_02675 0.36 -1.1 569,048 + AO353_02675 0.36 -1.0 569,048 + AO353_02675 0.36 -1.4 569,048 - AO353_02675 0.36 -1.1 569,049 - AO353_02675 0.36 +0.2 569,049 - AO353_02675 0.36 -0.4 569,049 - AO353_02675 0.36 -1.0 569,049 - AO353_02675 0.36 +0.1 569,049 - AO353_02675 0.36 +1.4 569,049 - AO353_02675 0.36 -0.0 569,049 - AO353_02675 0.36 +0.5 569,049 - AO353_02675 0.36 +1.4 569,049 - AO353_02675 0.36 +0.5 569,049 - AO353_02675 0.36 +0.2 569,118 + AO353_02675 0.42 -3.0
Or see this region's nucleotide sequence