Experiment: Lomefloxacin 0.001 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02660 and AO353_02665 are separated by 213 nucleotides AO353_02665 and AO353_02670 are separated by 232 nucleotides
AO353_02660: AO353_02660 - peptidase P60, at 565,757 to 566,380
_02660
AO353_02665: AO353_02665 - DnaA regulatory inactivator Hda, at 566,594 to 567,298
_02665
AO353_02670: AO353_02670 - hypothetical protein, at 567,531 to 568,601
_02670
Position (kb) 566
567
568 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.665 kb on - strand at 565.672 kb on + strand at 565.676 kb on + strand at 565.677 kb on - strand at 565.686 kb on + strand at 565.686 kb on + strand at 565.686 kb on + strand at 565.686 kb on + strand at 565.724 kb on + strand at 565.732 kb on + strand at 565.738 kb on + strand at 565.738 kb on - strand at 565.831 kb on - strand, within AO353_02660 at 565.831 kb on - strand, within AO353_02660 at 565.847 kb on - strand, within AO353_02660 at 565.908 kb on + strand, within AO353_02660 at 565.908 kb on + strand, within AO353_02660 at 565.909 kb on - strand, within AO353_02660 at 566.067 kb on + strand, within AO353_02660 at 566.185 kb on - strand, within AO353_02660 at 566.241 kb on + strand, within AO353_02660 at 566.241 kb on + strand, within AO353_02660 at 566.241 kb on + strand, within AO353_02660 at 566.241 kb on + strand, within AO353_02660 at 566.242 kb on - strand, within AO353_02660 at 566.246 kb on - strand, within AO353_02660 at 566.375 kb on + strand at 566.375 kb on + strand at 566.375 kb on + strand at 566.375 kb on + strand at 566.375 kb on + strand at 566.375 kb on + strand at 566.376 kb on - strand at 566.376 kb on - strand at 566.376 kb on - strand at 566.376 kb on - strand at 566.404 kb on + strand at 566.404 kb on + strand at 566.419 kb on + strand at 566.419 kb on + strand at 566.419 kb on + strand at 566.420 kb on - strand at 566.420 kb on - strand at 566.428 kb on + strand at 566.428 kb on + strand at 566.428 kb on + strand at 566.429 kb on - strand at 566.429 kb on - strand at 566.429 kb on - strand at 566.429 kb on - strand at 566.469 kb on + strand at 566.470 kb on - strand at 566.490 kb on + strand at 566.490 kb on + strand at 566.490 kb on + strand at 566.491 kb on - strand at 566.491 kb on - strand at 566.491 kb on - strand at 566.491 kb on - strand at 566.491 kb on - strand at 566.498 kb on + strand at 566.498 kb on + strand at 566.509 kb on + strand at 566.509 kb on + strand at 566.509 kb on + strand at 566.595 kb on + strand at 566.595 kb on + strand at 566.595 kb on + strand at 566.596 kb on - strand at 567.357 kb on - strand at 567.357 kb on - strand at 567.357 kb on - strand at 567.452 kb on + strand at 567.452 kb on + strand at 567.452 kb on + strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.453 kb on - strand at 567.474 kb on + strand at 567.475 kb on - strand at 567.475 kb on - strand at 567.556 kb on + strand at 567.556 kb on + strand at 567.556 kb on + strand at 567.556 kb on + strand at 567.557 kb on - strand at 567.557 kb on - strand at 567.557 kb on - strand at 567.557 kb on - strand at 567.557 kb on - strand at 567.573 kb on - strand at 567.574 kb on + strand at 567.576 kb on + strand at 567.577 kb on - strand at 567.862 kb on + strand, within AO353_02670 at 567.862 kb on + strand, within AO353_02670 at 567.862 kb on + strand, within AO353_02670 at 567.862 kb on + strand, within AO353_02670 at 567.862 kb on + strand, within AO353_02670 at 567.863 kb on - strand, within AO353_02670 at 567.863 kb on - strand, within AO353_02670 at 567.863 kb on - strand, within AO353_02670 at 567.863 kb on - strand, within AO353_02670 at 567.943 kb on + strand, within AO353_02670 at 567.943 kb on + strand, within AO353_02670 at 567.944 kb on - strand, within AO353_02670 at 568.029 kb on + strand, within AO353_02670 at 568.029 kb on + strand, within AO353_02670 at 568.030 kb on - strand, within AO353_02670 at 568.102 kb on + strand, within AO353_02670 at 568.102 kb on + strand, within AO353_02670 at 568.103 kb on - strand, within AO353_02670 at 568.273 kb on - strand, within AO353_02670 at 568.273 kb on - strand, within AO353_02670 at 568.273 kb on - strand, within AO353_02670 at 568.273 kb on - strand, within AO353_02670
Per-strain Table
Position Strand Gene LocusTag Fraction Lomefloxacin 0.001 mM remove 565,594 - +0.7 565,594 - -1.1 565,594 - +1.5 565,594 - +0.7 565,594 - +0.4 565,594 - +0.0 565,594 - -2.3 565,594 - +0.7 565,594 - +0.7 565,594 - +1.7 565,594 - +0.0 565,594 - +1.0 565,594 - +1.1 565,665 - +1.8 565,672 + +0.2 565,676 + +1.2 565,677 - +1.4 565,686 + +1.9 565,686 + -0.6 565,686 + +2.2 565,686 + -1.3 565,724 + +1.1 565,732 + +0.1 565,738 + +0.6 565,738 - +0.4 565,831 - AO353_02660 0.12 +0.1 565,831 - AO353_02660 0.12 +1.3 565,847 - AO353_02660 0.14 +4.3 565,908 + AO353_02660 0.24 +4.5 565,908 + AO353_02660 0.24 +4.4 565,909 - AO353_02660 0.24 +3.8 566,067 + AO353_02660 0.50 +1.9 566,185 - AO353_02660 0.69 +1.2 566,241 + AO353_02660 0.78 +2.8 566,241 + AO353_02660 0.78 +3.0 566,241 + AO353_02660 0.78 +3.1 566,241 + AO353_02660 0.78 +3.6 566,242 - AO353_02660 0.78 +1.6 566,246 - AO353_02660 0.78 +3.4 566,375 + +4.2 566,375 + +3.9 566,375 + +3.2 566,375 + +3.9 566,375 + +1.2 566,375 + +4.2 566,376 - +3.0 566,376 - +3.0 566,376 - +3.3 566,376 - +1.7 566,404 + +3.1 566,404 + +0.2 566,419 + +4.3 566,419 + +3.6 566,419 + +3.7 566,420 - +0.5 566,420 - -0.8 566,428 + +4.4 566,428 + +4.3 566,428 + +2.7 566,429 - +0.2 566,429 - +2.5 566,429 - +2.5 566,429 - +1.2 566,469 + +1.9 566,470 - +0.6 566,490 + -0.8 566,490 + +2.1 566,490 + +1.4 566,491 - -1.6 566,491 - +1.2 566,491 - +1.6 566,491 - +0.8 566,491 - -2.1 566,498 + +1.6 566,498 + +2.1 566,509 + +0.8 566,509 + +4.1 566,509 + +1.3 566,595 + +0.8 566,595 + +0.7 566,595 + +2.0 566,596 - -1.6 567,357 - -0.1 567,357 - +1.5 567,357 - +2.2 567,452 + -0.6 567,452 + +1.0 567,452 + -1.3 567,453 - +4.1 567,453 - -0.4 567,453 - -0.8 567,453 - -0.8 567,453 - +0.9 567,453 - -1.4 567,453 - +0.5 567,453 - -1.7 567,453 - -1.5 567,474 + -0.4 567,475 - +0.8 567,475 - -0.5 567,556 + -1.7 567,556 + -0.6 567,556 + -0.4 567,556 + -1.1 567,557 - -1.4 567,557 - -0.4 567,557 - -0.9 567,557 - -0.5 567,557 - -0.6 567,573 - -1.6 567,574 + +0.1 567,576 + -1.6 567,577 - +1.2 567,862 + AO353_02670 0.31 -1.9 567,862 + AO353_02670 0.31 -1.5 567,862 + AO353_02670 0.31 -1.1 567,862 + AO353_02670 0.31 +0.5 567,862 + AO353_02670 0.31 -0.4 567,863 - AO353_02670 0.31 +0.4 567,863 - AO353_02670 0.31 -2.2 567,863 - AO353_02670 0.31 -0.1 567,863 - AO353_02670 0.31 -0.1 567,943 + AO353_02670 0.38 -1.6 567,943 + AO353_02670 0.38 -1.1 567,944 - AO353_02670 0.39 -1.3 568,029 + AO353_02670 0.46 -0.4 568,029 + AO353_02670 0.46 -2.5 568,030 - AO353_02670 0.47 -1.7 568,102 + AO353_02670 0.53 -0.1 568,102 + AO353_02670 0.53 -1.1 568,103 - AO353_02670 0.53 +0.9 568,273 - AO353_02670 0.69 -1.1 568,273 - AO353_02670 0.69 -0.5 568,273 - AO353_02670 0.69 -0.4 568,273 - AO353_02670 0.69 +0.2
Or see this region's nucleotide sequence