Experiment: D-Glucosamine Hydrochloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS20025 and ABZR86_RS20030 are separated by 57 nucleotides ABZR86_RS20030 and ABZR86_RS20035 are separated by 12 nucleotides ABZR86_RS20035 and ABZR86_RS20040 are separated by 199 nucleotides
ABZR86_RS20025: ABZR86_RS20025 - glycerol-3-phosphate dehydrogenase, at 497,470 to 498,969
_RS20025
ABZR86_RS20030: ABZR86_RS20030 - MIP/aquaporin family protein, at 499,027 to 499,875
_RS20030
ABZR86_RS20035: ABZR86_RS20035 - glycerol kinase GlpK, at 499,888 to 501,387
_RS20035
ABZR86_RS20040: ABZR86_RS20040 - HDOD domain-containing protein, at 501,587 to 502,861
_RS20040
Position (kb) 499
500
501
502 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 498.907 kb on - strand at 498.979 kb on - strand at 499.111 kb on + strand at 499.111 kb on + strand at 499.111 kb on + strand at 499.111 kb on + strand at 499.111 kb on + strand at 499.111 kb on + strand at 499.111 kb on + strand at 499.112 kb on - strand, within ABZR86_RS20030 at 499.112 kb on - strand, within ABZR86_RS20030 at 499.112 kb on - strand, within ABZR86_RS20030 at 499.112 kb on - strand, within ABZR86_RS20030 at 499.120 kb on + strand, within ABZR86_RS20030 at 499.121 kb on - strand, within ABZR86_RS20030 at 499.121 kb on - strand, within ABZR86_RS20030 at 499.195 kb on + strand, within ABZR86_RS20030 at 499.195 kb on + strand, within ABZR86_RS20030 at 499.196 kb on - strand, within ABZR86_RS20030 at 499.196 kb on - strand, within ABZR86_RS20030 at 499.284 kb on - strand, within ABZR86_RS20030 at 499.284 kb on - strand, within ABZR86_RS20030 at 499.284 kb on - strand, within ABZR86_RS20030 at 499.291 kb on + strand, within ABZR86_RS20030 at 499.292 kb on - strand, within ABZR86_RS20030 at 499.292 kb on - strand, within ABZR86_RS20030 at 499.340 kb on - strand, within ABZR86_RS20030 at 499.340 kb on - strand, within ABZR86_RS20030 at 499.340 kb on - strand, within ABZR86_RS20030 at 499.369 kb on + strand, within ABZR86_RS20030 at 499.369 kb on + strand, within ABZR86_RS20030 at 499.369 kb on + strand, within ABZR86_RS20030 at 499.607 kb on - strand, within ABZR86_RS20030 at 499.708 kb on + strand, within ABZR86_RS20030 at 499.708 kb on + strand, within ABZR86_RS20030 at 499.708 kb on + strand, within ABZR86_RS20030 at 499.708 kb on + strand, within ABZR86_RS20030 at 499.708 kb on + strand, within ABZR86_RS20030 at 499.708 kb on + strand, within ABZR86_RS20030 at 499.709 kb on - strand, within ABZR86_RS20030 at 499.709 kb on - strand, within ABZR86_RS20030 at 499.709 kb on - strand, within ABZR86_RS20030 at 499.709 kb on - strand, within ABZR86_RS20030 at 499.709 kb on - strand, within ABZR86_RS20030 at 499.709 kb on - strand, within ABZR86_RS20030 at 499.709 kb on - strand, within ABZR86_RS20030 at 499.719 kb on - strand, within ABZR86_RS20030 at 499.719 kb on - strand, within ABZR86_RS20030 at 499.900 kb on + strand at 499.900 kb on + strand at 499.900 kb on + strand at 499.900 kb on + strand at 499.901 kb on - strand at 499.901 kb on - strand at 499.965 kb on + strand at 499.966 kb on - strand at 500.001 kb on - strand at 500.001 kb on - strand at 500.245 kb on + strand, within ABZR86_RS20035 at 500.291 kb on - strand, within ABZR86_RS20035 at 500.291 kb on - strand, within ABZR86_RS20035 at 500.385 kb on + strand, within ABZR86_RS20035 at 500.434 kb on + strand, within ABZR86_RS20035 at 500.434 kb on + strand, within ABZR86_RS20035 at 500.461 kb on + strand, within ABZR86_RS20035 at 500.462 kb on - strand, within ABZR86_RS20035 at 500.462 kb on - strand, within ABZR86_RS20035 at 500.470 kb on + strand, within ABZR86_RS20035 at 500.470 kb on + strand, within ABZR86_RS20035 at 500.470 kb on + strand, within ABZR86_RS20035 at 500.470 kb on + strand, within ABZR86_RS20035 at 500.470 kb on + strand, within ABZR86_RS20035 at 500.471 kb on - strand, within ABZR86_RS20035 at 500.471 kb on - strand, within ABZR86_RS20035 at 500.570 kb on + strand, within ABZR86_RS20035 at 500.571 kb on - strand, within ABZR86_RS20035 at 500.574 kb on + strand, within ABZR86_RS20035 at 500.574 kb on + strand, within ABZR86_RS20035 at 500.575 kb on - strand, within ABZR86_RS20035 at 500.575 kb on - strand, within ABZR86_RS20035 at 500.575 kb on - strand, within ABZR86_RS20035 at 500.680 kb on + strand, within ABZR86_RS20035 at 500.681 kb on - strand, within ABZR86_RS20035 at 500.681 kb on - strand, within ABZR86_RS20035 at 500.681 kb on - strand, within ABZR86_RS20035 at 500.681 kb on - strand, within ABZR86_RS20035 at 500.915 kb on - strand, within ABZR86_RS20035 at 501.043 kb on + strand, within ABZR86_RS20035 at 501.335 kb on - strand at 501.582 kb on + strand at 502.069 kb on - strand, within ABZR86_RS20040 at 502.098 kb on + strand, within ABZR86_RS20040 at 502.099 kb on - strand, within ABZR86_RS20040 at 502.242 kb on + strand, within ABZR86_RS20040
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (N) remove 498,907 - +0.6 498,979 - -0.8 499,111 + -0.1 499,111 + +0.1 499,111 + +0.4 499,111 + +0.2 499,111 + +0.4 499,111 + -0.2 499,111 + +0.1 499,112 - ABZR86_RS20030 0.10 -0.0 499,112 - ABZR86_RS20030 0.10 -0.3 499,112 - ABZR86_RS20030 0.10 -0.2 499,112 - ABZR86_RS20030 0.10 +1.9 499,120 + ABZR86_RS20030 0.11 -0.0 499,121 - ABZR86_RS20030 0.11 -0.3 499,121 - ABZR86_RS20030 0.11 +0.1 499,195 + ABZR86_RS20030 0.20 +0.3 499,195 + ABZR86_RS20030 0.20 +0.0 499,196 - ABZR86_RS20030 0.20 +0.4 499,196 - ABZR86_RS20030 0.20 +0.3 499,284 - ABZR86_RS20030 0.30 +0.2 499,284 - ABZR86_RS20030 0.30 -1.6 499,284 - ABZR86_RS20030 0.30 -0.0 499,291 + ABZR86_RS20030 0.31 +0.7 499,292 - ABZR86_RS20030 0.31 -0.1 499,292 - ABZR86_RS20030 0.31 -0.3 499,340 - ABZR86_RS20030 0.37 -0.0 499,340 - ABZR86_RS20030 0.37 -1.3 499,340 - ABZR86_RS20030 0.37 +0.1 499,369 + ABZR86_RS20030 0.40 -0.1 499,369 + ABZR86_RS20030 0.40 -0.8 499,369 + ABZR86_RS20030 0.40 -0.3 499,607 - ABZR86_RS20030 0.68 +0.2 499,708 + ABZR86_RS20030 0.80 -0.6 499,708 + ABZR86_RS20030 0.80 -1.0 499,708 + ABZR86_RS20030 0.80 -0.5 499,708 + ABZR86_RS20030 0.80 +0.2 499,708 + ABZR86_RS20030 0.80 -1.2 499,708 + ABZR86_RS20030 0.80 -1.4 499,709 - ABZR86_RS20030 0.80 +0.6 499,709 - ABZR86_RS20030 0.80 +0.7 499,709 - ABZR86_RS20030 0.80 -0.2 499,709 - ABZR86_RS20030 0.80 +0.2 499,709 - ABZR86_RS20030 0.80 -1.5 499,709 - ABZR86_RS20030 0.80 -0.5 499,709 - ABZR86_RS20030 0.80 +0.3 499,719 - ABZR86_RS20030 0.82 +0.1 499,719 - ABZR86_RS20030 0.82 -0.9 499,900 + +0.6 499,900 + -0.2 499,900 + +0.1 499,900 + -0.2 499,901 - +0.3 499,901 - +1.0 499,965 + -0.1 499,966 - +0.3 500,001 - -0.1 500,001 - -0.5 500,245 + ABZR86_RS20035 0.24 +0.0 500,291 - ABZR86_RS20035 0.27 -0.1 500,291 - ABZR86_RS20035 0.27 +0.1 500,385 + ABZR86_RS20035 0.33 +0.2 500,434 + ABZR86_RS20035 0.36 +0.3 500,434 + ABZR86_RS20035 0.36 -0.2 500,461 + ABZR86_RS20035 0.38 +0.3 500,462 - ABZR86_RS20035 0.38 -0.4 500,462 - ABZR86_RS20035 0.38 +0.7 500,470 + ABZR86_RS20035 0.39 +0.1 500,470 + ABZR86_RS20035 0.39 -0.4 500,470 + ABZR86_RS20035 0.39 -0.4 500,470 + ABZR86_RS20035 0.39 +0.7 500,470 + ABZR86_RS20035 0.39 -1.1 500,471 - ABZR86_RS20035 0.39 +0.3 500,471 - ABZR86_RS20035 0.39 -0.3 500,570 + ABZR86_RS20035 0.45 +0.4 500,571 - ABZR86_RS20035 0.46 +0.0 500,574 + ABZR86_RS20035 0.46 +0.6 500,574 + ABZR86_RS20035 0.46 +0.8 500,575 - ABZR86_RS20035 0.46 -0.5 500,575 - ABZR86_RS20035 0.46 +0.9 500,575 - ABZR86_RS20035 0.46 +0.5 500,680 + ABZR86_RS20035 0.53 +0.2 500,681 - ABZR86_RS20035 0.53 -3.6 500,681 - ABZR86_RS20035 0.53 +0.5 500,681 - ABZR86_RS20035 0.53 -0.4 500,681 - ABZR86_RS20035 0.53 -0.1 500,915 - ABZR86_RS20035 0.68 +1.0 501,043 + ABZR86_RS20035 0.77 -0.2 501,335 - +0.5 501,582 + +0.7 502,069 - ABZR86_RS20040 0.38 +0.1 502,098 + ABZR86_RS20040 0.40 +0.1 502,099 - ABZR86_RS20040 0.40 +0.2 502,242 + ABZR86_RS20040 0.51 -0.7
Or see this region's nucleotide sequence