Experiment: D-Glucosamine Hydrochloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS19915 and ABZR86_RS19920 are separated by 111 nucleotides ABZR86_RS19920 and ABZR86_RS19925 are separated by 175 nucleotides ABZR86_RS19925 and ABZR86_RS19930 are separated by 338 nucleotides
ABZR86_RS19915: ABZR86_RS19915 - hypothetical protein, at 478,210 to 478,614
_RS19915
ABZR86_RS19920: ABZR86_RS19920 - MGMT family protein, at 478,726 to 479,067
_RS19920
ABZR86_RS19925: ABZR86_RS19925 - DNA helicase RecQ, at 479,243 to 481,054
_RS19925
ABZR86_RS19930: ABZR86_RS19930 - YbaL family putative K(+) efflux transporter, at 481,393 to 483,051
_RS19930
Position (kb) 479
480
481
482 Strain fitness (log2 ratio) -2
-1
0
1 at 478.313 kb on + strand, within ABZR86_RS19915 at 478.313 kb on + strand, within ABZR86_RS19915 at 478.314 kb on - strand, within ABZR86_RS19915 at 478.496 kb on + strand, within ABZR86_RS19915 at 478.496 kb on + strand, within ABZR86_RS19915 at 478.497 kb on - strand, within ABZR86_RS19915 at 478.497 kb on - strand, within ABZR86_RS19915 at 478.497 kb on - strand, within ABZR86_RS19915 at 478.497 kb on - strand, within ABZR86_RS19915 at 478.497 kb on - strand, within ABZR86_RS19915 at 478.497 kb on - strand, within ABZR86_RS19915 at 478.497 kb on - strand, within ABZR86_RS19915 at 478.497 kb on - strand, within ABZR86_RS19915 at 478.497 kb on - strand, within ABZR86_RS19915 at 478.547 kb on + strand, within ABZR86_RS19915 at 478.547 kb on + strand, within ABZR86_RS19915 at 478.678 kb on + strand at 478.679 kb on - strand at 478.691 kb on + strand at 478.691 kb on + strand at 478.691 kb on + strand at 478.692 kb on - strand at 478.692 kb on - strand at 478.692 kb on - strand at 478.692 kb on - strand at 478.692 kb on - strand at 478.692 kb on - strand at 478.692 kb on - strand at 478.792 kb on + strand, within ABZR86_RS19920 at 478.793 kb on - strand, within ABZR86_RS19920 at 479.066 kb on - strand at 479.146 kb on + strand at 479.147 kb on - strand at 479.147 kb on - strand at 479.155 kb on + strand at 479.155 kb on + strand at 479.156 kb on - strand at 479.162 kb on - strand at 479.162 kb on - strand at 479.162 kb on - strand at 479.162 kb on - strand at 479.183 kb on + strand at 479.183 kb on + strand at 479.183 kb on + strand at 479.183 kb on + strand at 479.183 kb on + strand at 479.183 kb on + strand at 479.184 kb on - strand at 479.184 kb on - strand at 479.184 kb on - strand at 479.184 kb on - strand at 479.184 kb on - strand at 479.184 kb on - strand at 479.184 kb on - strand at 479.184 kb on - strand at 479.230 kb on + strand at 479.285 kb on + strand at 479.285 kb on + strand at 479.498 kb on + strand, within ABZR86_RS19925 at 479.498 kb on + strand, within ABZR86_RS19925 at 479.498 kb on + strand, within ABZR86_RS19925 at 479.499 kb on - strand, within ABZR86_RS19925 at 479.499 kb on - strand, within ABZR86_RS19925 at 479.576 kb on + strand, within ABZR86_RS19925 at 479.576 kb on + strand, within ABZR86_RS19925 at 479.576 kb on + strand, within ABZR86_RS19925 at 479.576 kb on + strand, within ABZR86_RS19925 at 479.577 kb on - strand, within ABZR86_RS19925 at 479.577 kb on - strand, within ABZR86_RS19925 at 479.942 kb on + strand, within ABZR86_RS19925 at 479.942 kb on + strand, within ABZR86_RS19925 at 479.942 kb on + strand, within ABZR86_RS19925 at 479.943 kb on - strand, within ABZR86_RS19925 at 480.014 kb on + strand, within ABZR86_RS19925 at 480.014 kb on + strand, within ABZR86_RS19925 at 480.014 kb on + strand, within ABZR86_RS19925 at 480.015 kb on - strand, within ABZR86_RS19925 at 480.176 kb on + strand, within ABZR86_RS19925 at 480.176 kb on + strand, within ABZR86_RS19925 at 480.177 kb on - strand, within ABZR86_RS19925 at 480.177 kb on - strand, within ABZR86_RS19925 at 480.179 kb on + strand, within ABZR86_RS19925 at 480.180 kb on - strand, within ABZR86_RS19925 at 480.180 kb on - strand, within ABZR86_RS19925 at 480.180 kb on - strand, within ABZR86_RS19925 at 480.236 kb on + strand, within ABZR86_RS19925 at 480.236 kb on + strand, within ABZR86_RS19925 at 480.237 kb on - strand, within ABZR86_RS19925 at 480.237 kb on - strand, within ABZR86_RS19925 at 480.237 kb on - strand, within ABZR86_RS19925 at 480.398 kb on + strand, within ABZR86_RS19925 at 480.398 kb on + strand, within ABZR86_RS19925 at 480.398 kb on + strand, within ABZR86_RS19925 at 480.398 kb on + strand, within ABZR86_RS19925 at 480.398 kb on + strand, within ABZR86_RS19925 at 480.398 kb on + strand, within ABZR86_RS19925 at 480.398 kb on + strand, within ABZR86_RS19925 at 480.398 kb on + strand, within ABZR86_RS19925 at 480.398 kb on + strand, within ABZR86_RS19925 at 480.399 kb on - strand, within ABZR86_RS19925 at 480.399 kb on - strand, within ABZR86_RS19925 at 480.399 kb on - strand, within ABZR86_RS19925 at 480.399 kb on - strand, within ABZR86_RS19925 at 480.399 kb on - strand, within ABZR86_RS19925 at 480.399 kb on - strand, within ABZR86_RS19925 at 480.399 kb on - strand, within ABZR86_RS19925 at 480.399 kb on - strand, within ABZR86_RS19925 at 480.491 kb on + strand, within ABZR86_RS19925 at 480.492 kb on - strand, within ABZR86_RS19925 at 480.492 kb on - strand, within ABZR86_RS19925 at 480.683 kb on + strand, within ABZR86_RS19925 at 480.720 kb on + strand, within ABZR86_RS19925 at 480.721 kb on - strand, within ABZR86_RS19925 at 480.833 kb on + strand, within ABZR86_RS19925 at 480.833 kb on + strand, within ABZR86_RS19925 at 480.905 kb on + strand at 480.905 kb on + strand at 480.905 kb on + strand at 480.905 kb on + strand at 480.905 kb on + strand at 480.905 kb on + strand at 480.905 kb on + strand at 480.905 kb on + strand at 480.905 kb on + strand at 480.905 kb on + strand at 480.905 kb on + strand at 480.905 kb on + strand at 480.906 kb on - strand at 480.906 kb on - strand at 480.906 kb on - strand at 481.013 kb on + strand at 481.013 kb on + strand at 481.117 kb on + strand at 481.118 kb on - strand at 481.118 kb on - strand at 481.187 kb on - strand at 481.294 kb on - strand at 481.294 kb on - strand at 481.294 kb on - strand at 481.496 kb on - strand at 481.794 kb on + strand, within ABZR86_RS19930 at 481.794 kb on + strand, within ABZR86_RS19930
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (N) remove 478,313 + ABZR86_RS19915 0.25 -0.5 478,313 + ABZR86_RS19915 0.25 +1.0 478,314 - ABZR86_RS19915 0.26 -0.1 478,496 + ABZR86_RS19915 0.71 -0.1 478,496 + ABZR86_RS19915 0.71 +0.7 478,497 - ABZR86_RS19915 0.71 -1.1 478,497 - ABZR86_RS19915 0.71 -1.4 478,497 - ABZR86_RS19915 0.71 -0.9 478,497 - ABZR86_RS19915 0.71 +0.6 478,497 - ABZR86_RS19915 0.71 +0.2 478,497 - ABZR86_RS19915 0.71 +0.3 478,497 - ABZR86_RS19915 0.71 +0.3 478,497 - ABZR86_RS19915 0.71 +0.2 478,497 - ABZR86_RS19915 0.71 -0.7 478,547 + ABZR86_RS19915 0.83 -1.5 478,547 + ABZR86_RS19915 0.83 +0.1 478,678 + +0.3 478,679 - -0.0 478,691 + +0.2 478,691 + -0.6 478,691 + -0.0 478,692 - -0.4 478,692 - +0.4 478,692 - +0.5 478,692 - +0.1 478,692 - -0.2 478,692 - +0.3 478,692 - -0.0 478,792 + ABZR86_RS19920 0.19 -0.1 478,793 - ABZR86_RS19920 0.20 +0.0 479,066 - +0.9 479,146 + -0.2 479,147 - -0.4 479,147 - +0.3 479,155 + +0.2 479,155 + +0.0 479,156 - -0.0 479,162 - +0.3 479,162 - -0.9 479,162 - -0.0 479,162 - +0.1 479,183 + +0.2 479,183 + +1.5 479,183 + +0.3 479,183 + -0.1 479,183 + -1.1 479,183 + -0.0 479,184 - -0.3 479,184 - +0.3 479,184 - -0.1 479,184 - +0.0 479,184 - -0.3 479,184 - -0.7 479,184 - +0.2 479,184 - -0.1 479,230 + -1.0 479,285 + +0.8 479,285 + +0.6 479,498 + ABZR86_RS19925 0.14 +0.1 479,498 + ABZR86_RS19925 0.14 +1.4 479,498 + ABZR86_RS19925 0.14 +0.6 479,499 - ABZR86_RS19925 0.14 +0.4 479,499 - ABZR86_RS19925 0.14 +0.9 479,576 + ABZR86_RS19925 0.18 -0.2 479,576 + ABZR86_RS19925 0.18 +0.1 479,576 + ABZR86_RS19925 0.18 +1.2 479,576 + ABZR86_RS19925 0.18 -0.3 479,577 - ABZR86_RS19925 0.18 +0.8 479,577 - ABZR86_RS19925 0.18 +0.2 479,942 + ABZR86_RS19925 0.39 +1.2 479,942 + ABZR86_RS19925 0.39 +0.5 479,942 + ABZR86_RS19925 0.39 +0.4 479,943 - ABZR86_RS19925 0.39 +0.8 480,014 + ABZR86_RS19925 0.43 +1.0 480,014 + ABZR86_RS19925 0.43 +0.3 480,014 + ABZR86_RS19925 0.43 +1.0 480,015 - ABZR86_RS19925 0.43 -1.3 480,176 + ABZR86_RS19925 0.51 +0.6 480,176 + ABZR86_RS19925 0.51 +0.5 480,177 - ABZR86_RS19925 0.52 +0.2 480,177 - ABZR86_RS19925 0.52 +0.8 480,179 + ABZR86_RS19925 0.52 +1.1 480,180 - ABZR86_RS19925 0.52 +0.5 480,180 - ABZR86_RS19925 0.52 +0.4 480,180 - ABZR86_RS19925 0.52 +1.5 480,236 + ABZR86_RS19925 0.55 +0.4 480,236 + ABZR86_RS19925 0.55 +0.5 480,237 - ABZR86_RS19925 0.55 +0.6 480,237 - ABZR86_RS19925 0.55 +0.3 480,237 - ABZR86_RS19925 0.55 +0.6 480,398 + ABZR86_RS19925 0.64 +0.8 480,398 + ABZR86_RS19925 0.64 +1.1 480,398 + ABZR86_RS19925 0.64 +0.1 480,398 + ABZR86_RS19925 0.64 +0.4 480,398 + ABZR86_RS19925 0.64 +0.9 480,398 + ABZR86_RS19925 0.64 +0.3 480,398 + ABZR86_RS19925 0.64 +0.7 480,398 + ABZR86_RS19925 0.64 +0.9 480,398 + ABZR86_RS19925 0.64 +0.5 480,399 - ABZR86_RS19925 0.64 +0.5 480,399 - ABZR86_RS19925 0.64 +1.0 480,399 - ABZR86_RS19925 0.64 +0.4 480,399 - ABZR86_RS19925 0.64 +0.8 480,399 - ABZR86_RS19925 0.64 +0.4 480,399 - ABZR86_RS19925 0.64 +0.7 480,399 - ABZR86_RS19925 0.64 +1.0 480,399 - ABZR86_RS19925 0.64 +0.4 480,491 + ABZR86_RS19925 0.69 +1.1 480,492 - ABZR86_RS19925 0.69 +0.9 480,492 - ABZR86_RS19925 0.69 +0.8 480,683 + ABZR86_RS19925 0.79 +0.9 480,720 + ABZR86_RS19925 0.82 +0.7 480,721 - ABZR86_RS19925 0.82 +0.6 480,833 + ABZR86_RS19925 0.88 -1.5 480,833 + ABZR86_RS19925 0.88 -2.0 480,905 + +0.6 480,905 + +1.4 480,905 + +0.0 480,905 + +0.3 480,905 + +0.6 480,905 + -0.3 480,905 + +0.9 480,905 + +0.6 480,905 + +0.5 480,905 + +0.3 480,905 + +0.5 480,905 + -0.6 480,906 - +0.3 480,906 - -0.0 480,906 - +0.5 481,013 + -0.9 481,013 + +1.7 481,117 + -0.5 481,118 - +0.1 481,118 - -0.1 481,187 - -0.1 481,294 - -1.0 481,294 - -0.4 481,294 - +0.7 481,496 - -0.7 481,794 + ABZR86_RS19930 0.24 -0.1 481,794 + ABZR86_RS19930 0.24 -0.6
Or see this region's nucleotide sequence