Experiment: D-Glucosamine Hydrochloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS13485 and ABZR86_RS13490 are separated by 35 nucleotides ABZR86_RS13490 and ABZR86_RS13495 are separated by 345 nucleotides
ABZR86_RS13485: ABZR86_RS13485 - malate synthase A, at 3,021,564 to 3,023,195
_RS13485
ABZR86_RS13490: ABZR86_RS13490 - isocitrate lyase, at 3,023,231 to 3,024,532
_RS13490
ABZR86_RS13495: ABZR86_RS13495 - YifB family Mg chelatase-like AAA ATPase, at 3,024,878 to 3,026,380
_RS13495
Position (kb)
3023
3024
3025 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3022.404 kb on + strand, within ABZR86_RS13485 at 3022.404 kb on + strand, within ABZR86_RS13485 at 3022.404 kb on + strand, within ABZR86_RS13485 at 3022.404 kb on + strand, within ABZR86_RS13485 at 3022.404 kb on + strand, within ABZR86_RS13485 at 3022.405 kb on - strand, within ABZR86_RS13485 at 3022.405 kb on - strand, within ABZR86_RS13485 at 3022.405 kb on - strand, within ABZR86_RS13485 at 3022.405 kb on - strand, within ABZR86_RS13485 at 3022.405 kb on - strand, within ABZR86_RS13485 at 3022.405 kb on - strand, within ABZR86_RS13485 at 3022.405 kb on - strand, within ABZR86_RS13485 at 3022.405 kb on - strand, within ABZR86_RS13485 at 3022.500 kb on + strand, within ABZR86_RS13485 at 3022.500 kb on + strand, within ABZR86_RS13485 at 3022.501 kb on - strand, within ABZR86_RS13485 at 3022.501 kb on - strand, within ABZR86_RS13485 at 3022.501 kb on - strand, within ABZR86_RS13485 at 3022.716 kb on + strand, within ABZR86_RS13485 at 3022.716 kb on + strand, within ABZR86_RS13485 at 3022.716 kb on + strand, within ABZR86_RS13485 at 3022.716 kb on + strand, within ABZR86_RS13485 at 3022.716 kb on + strand, within ABZR86_RS13485 at 3022.716 kb on + strand, within ABZR86_RS13485 at 3022.716 kb on + strand, within ABZR86_RS13485 at 3022.716 kb on + strand, within ABZR86_RS13485 at 3022.716 kb on + strand, within ABZR86_RS13485 at 3022.716 kb on + strand, within ABZR86_RS13485 at 3022.716 kb on + strand, within ABZR86_RS13485 at 3022.716 kb on + strand, within ABZR86_RS13485 at 3022.717 kb on - strand, within ABZR86_RS13485 at 3022.717 kb on - strand, within ABZR86_RS13485 at 3022.717 kb on - strand, within ABZR86_RS13485 at 3022.717 kb on - strand, within ABZR86_RS13485 at 3022.717 kb on - strand, within ABZR86_RS13485 at 3022.717 kb on - strand, within ABZR86_RS13485 at 3022.717 kb on - strand, within ABZR86_RS13485 at 3022.717 kb on - strand, within ABZR86_RS13485 at 3022.717 kb on - strand, within ABZR86_RS13485 at 3022.717 kb on - strand, within ABZR86_RS13485 at 3022.717 kb on - strand, within ABZR86_RS13485 at 3022.717 kb on - strand, within ABZR86_RS13485 at 3022.717 kb on - strand, within ABZR86_RS13485 at 3022.717 kb on - strand, within ABZR86_RS13485 at 3022.717 kb on - strand, within ABZR86_RS13485 at 3022.717 kb on - strand, within ABZR86_RS13485 at 3022.848 kb on + strand, within ABZR86_RS13485 at 3022.848 kb on + strand, within ABZR86_RS13485 at 3022.848 kb on + strand, within ABZR86_RS13485 at 3022.849 kb on - strand, within ABZR86_RS13485 at 3022.849 kb on - strand, within ABZR86_RS13485 at 3022.850 kb on + strand, within ABZR86_RS13485 at 3023.060 kb on + strand at 3023.061 kb on - strand at 3023.061 kb on - strand at 3023.061 kb on - strand at 3023.061 kb on - strand at 3023.061 kb on - strand at 3023.061 kb on - strand at 3023.178 kb on + strand at 3023.178 kb on + strand at 3023.178 kb on + strand at 3023.178 kb on + strand at 3023.312 kb on + strand at 3023.312 kb on + strand at 3023.312 kb on + strand at 3023.313 kb on - strand at 3023.313 kb on - strand at 3023.313 kb on - strand at 3023.313 kb on - strand at 3023.313 kb on - strand at 3023.313 kb on - strand at 3023.489 kb on + strand, within ABZR86_RS13490 at 3023.489 kb on + strand, within ABZR86_RS13490 at 3023.490 kb on - strand, within ABZR86_RS13490 at 3023.490 kb on - strand, within ABZR86_RS13490 at 3023.540 kb on + strand, within ABZR86_RS13490 at 3023.540 kb on + strand, within ABZR86_RS13490 at 3023.540 kb on + strand, within ABZR86_RS13490 at 3023.540 kb on + strand, within ABZR86_RS13490 at 3023.540 kb on + strand, within ABZR86_RS13490 at 3023.541 kb on - strand, within ABZR86_RS13490 at 3023.541 kb on - strand, within ABZR86_RS13490 at 3023.558 kb on + strand, within ABZR86_RS13490 at 3023.559 kb on - strand, within ABZR86_RS13490 at 3024.044 kb on + strand, within ABZR86_RS13490 at 3024.044 kb on + strand, within ABZR86_RS13490 at 3024.045 kb on - strand, within ABZR86_RS13490 at 3024.045 kb on - strand, within ABZR86_RS13490 at 3024.155 kb on + strand, within ABZR86_RS13490 at 3024.155 kb on + strand, within ABZR86_RS13490 at 3024.156 kb on - strand, within ABZR86_RS13490 at 3024.156 kb on - strand, within ABZR86_RS13490 at 3024.156 kb on - strand, within ABZR86_RS13490 at 3024.156 kb on - strand, within ABZR86_RS13490 at 3024.242 kb on + strand, within ABZR86_RS13490 at 3024.242 kb on + strand, within ABZR86_RS13490 at 3024.242 kb on + strand, within ABZR86_RS13490 at 3024.242 kb on + strand, within ABZR86_RS13490 at 3024.242 kb on + strand, within ABZR86_RS13490 at 3024.242 kb on + strand, within ABZR86_RS13490 at 3024.243 kb on - strand, within ABZR86_RS13490 at 3024.243 kb on - strand, within ABZR86_RS13490 at 3024.287 kb on + strand, within ABZR86_RS13490 at 3024.287 kb on + strand, within ABZR86_RS13490 at 3024.288 kb on - strand, within ABZR86_RS13490 at 3024.288 kb on - strand, within ABZR86_RS13490 at 3024.288 kb on - strand, within ABZR86_RS13490 at 3024.315 kb on - strand, within ABZR86_RS13490 at 3024.385 kb on + strand, within ABZR86_RS13490 at 3024.386 kb on - strand, within ABZR86_RS13490 at 3024.386 kb on - strand, within ABZR86_RS13490 at 3024.386 kb on - strand, within ABZR86_RS13490 at 3024.422 kb on + strand at 3024.776 kb on + strand at 3024.798 kb on + strand at 3024.799 kb on - strand at 3024.799 kb on - strand at 3024.799 kb on - strand at 3024.799 kb on - strand at 3024.799 kb on - strand at 3024.801 kb on + strand at 3024.802 kb on - strand at 3024.835 kb on + strand at 3024.858 kb on + strand at 3024.859 kb on - strand at 3024.879 kb on + strand at 3024.985 kb on - strand at 3024.985 kb on - strand at 3025.323 kb on + strand, within ABZR86_RS13495
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (N) remove 3,022,404 + ABZR86_RS13485 0.51 -0.0 3,022,404 + ABZR86_RS13485 0.51 +0.6 3,022,404 + ABZR86_RS13485 0.51 +0.0 3,022,404 + ABZR86_RS13485 0.51 +1.1 3,022,404 + ABZR86_RS13485 0.51 +0.7 3,022,405 - ABZR86_RS13485 0.52 +0.0 3,022,405 - ABZR86_RS13485 0.52 +0.2 3,022,405 - ABZR86_RS13485 0.52 +0.2 3,022,405 - ABZR86_RS13485 0.52 -0.3 3,022,405 - ABZR86_RS13485 0.52 +0.1 3,022,405 - ABZR86_RS13485 0.52 -0.0 3,022,405 - ABZR86_RS13485 0.52 -0.3 3,022,405 - ABZR86_RS13485 0.52 -0.1 3,022,500 + ABZR86_RS13485 0.57 -0.3 3,022,500 + ABZR86_RS13485 0.57 +0.4 3,022,501 - ABZR86_RS13485 0.57 +1.0 3,022,501 - ABZR86_RS13485 0.57 -0.0 3,022,501 - ABZR86_RS13485 0.57 +0.4 3,022,716 + ABZR86_RS13485 0.71 -0.7 3,022,716 + ABZR86_RS13485 0.71 -0.5 3,022,716 + ABZR86_RS13485 0.71 +0.4 3,022,716 + ABZR86_RS13485 0.71 -0.2 3,022,716 + ABZR86_RS13485 0.71 -0.7 3,022,716 + ABZR86_RS13485 0.71 -0.3 3,022,716 + ABZR86_RS13485 0.71 +0.9 3,022,716 + ABZR86_RS13485 0.71 +0.2 3,022,716 + ABZR86_RS13485 0.71 +0.0 3,022,716 + ABZR86_RS13485 0.71 -0.6 3,022,716 + ABZR86_RS13485 0.71 -0.4 3,022,716 + ABZR86_RS13485 0.71 +1.0 3,022,717 - ABZR86_RS13485 0.71 +0.2 3,022,717 - ABZR86_RS13485 0.71 +0.3 3,022,717 - ABZR86_RS13485 0.71 -0.6 3,022,717 - ABZR86_RS13485 0.71 -0.1 3,022,717 - ABZR86_RS13485 0.71 -0.2 3,022,717 - ABZR86_RS13485 0.71 -0.1 3,022,717 - ABZR86_RS13485 0.71 +0.1 3,022,717 - ABZR86_RS13485 0.71 +0.1 3,022,717 - ABZR86_RS13485 0.71 +0.4 3,022,717 - ABZR86_RS13485 0.71 -2.3 3,022,717 - ABZR86_RS13485 0.71 +0.4 3,022,717 - ABZR86_RS13485 0.71 +0.1 3,022,717 - ABZR86_RS13485 0.71 -0.0 3,022,717 - ABZR86_RS13485 0.71 +0.1 3,022,717 - ABZR86_RS13485 0.71 +0.5 3,022,717 - ABZR86_RS13485 0.71 -1.1 3,022,848 + ABZR86_RS13485 0.79 -0.2 3,022,848 + ABZR86_RS13485 0.79 +0.1 3,022,848 + ABZR86_RS13485 0.79 +0.4 3,022,849 - ABZR86_RS13485 0.79 +0.8 3,022,849 - ABZR86_RS13485 0.79 +0.5 3,022,850 + ABZR86_RS13485 0.79 +0.0 3,023,060 + -0.1 3,023,061 - +0.3 3,023,061 - +1.2 3,023,061 - +0.5 3,023,061 - -1.2 3,023,061 - -0.3 3,023,061 - -1.3 3,023,178 + -0.4 3,023,178 + +1.5 3,023,178 + -0.5 3,023,178 + -1.0 3,023,312 + -1.7 3,023,312 + -0.5 3,023,312 + +0.7 3,023,313 - -0.5 3,023,313 - -0.1 3,023,313 - -0.5 3,023,313 - -0.2 3,023,313 - -0.2 3,023,313 - -0.7 3,023,489 + ABZR86_RS13490 0.20 -0.5 3,023,489 + ABZR86_RS13490 0.20 -0.6 3,023,490 - ABZR86_RS13490 0.20 -0.1 3,023,490 - ABZR86_RS13490 0.20 +0.3 3,023,540 + ABZR86_RS13490 0.24 -1.1 3,023,540 + ABZR86_RS13490 0.24 +0.5 3,023,540 + ABZR86_RS13490 0.24 -0.3 3,023,540 + ABZR86_RS13490 0.24 -0.2 3,023,540 + ABZR86_RS13490 0.24 -0.2 3,023,541 - ABZR86_RS13490 0.24 +0.3 3,023,541 - ABZR86_RS13490 0.24 +0.1 3,023,558 + ABZR86_RS13490 0.25 -0.6 3,023,559 - ABZR86_RS13490 0.25 -0.2 3,024,044 + ABZR86_RS13490 0.62 +0.0 3,024,044 + ABZR86_RS13490 0.62 +0.1 3,024,045 - ABZR86_RS13490 0.63 -0.1 3,024,045 - ABZR86_RS13490 0.63 +0.6 3,024,155 + ABZR86_RS13490 0.71 -0.3 3,024,155 + ABZR86_RS13490 0.71 -0.9 3,024,156 - ABZR86_RS13490 0.71 -0.8 3,024,156 - ABZR86_RS13490 0.71 +0.1 3,024,156 - ABZR86_RS13490 0.71 +0.4 3,024,156 - ABZR86_RS13490 0.71 +0.4 3,024,242 + ABZR86_RS13490 0.78 -0.7 3,024,242 + ABZR86_RS13490 0.78 +0.4 3,024,242 + ABZR86_RS13490 0.78 -0.9 3,024,242 + ABZR86_RS13490 0.78 +0.6 3,024,242 + ABZR86_RS13490 0.78 +0.1 3,024,242 + ABZR86_RS13490 0.78 +0.0 3,024,243 - ABZR86_RS13490 0.78 -0.3 3,024,243 - ABZR86_RS13490 0.78 +0.2 3,024,287 + ABZR86_RS13490 0.81 +2.0 3,024,287 + ABZR86_RS13490 0.81 -0.1 3,024,288 - ABZR86_RS13490 0.81 +0.4 3,024,288 - ABZR86_RS13490 0.81 -0.7 3,024,288 - ABZR86_RS13490 0.81 +0.1 3,024,315 - ABZR86_RS13490 0.83 -0.5 3,024,385 + ABZR86_RS13490 0.89 -0.6 3,024,386 - ABZR86_RS13490 0.89 +0.1 3,024,386 - ABZR86_RS13490 0.89 +0.7 3,024,386 - ABZR86_RS13490 0.89 +0.0 3,024,422 + -0.8 3,024,776 + -2.6 3,024,798 + +0.8 3,024,799 - +0.0 3,024,799 - -0.7 3,024,799 - -0.7 3,024,799 - -0.9 3,024,799 - -0.1 3,024,801 + +0.1 3,024,802 - +0.2 3,024,835 + +0.1 3,024,858 + +0.1 3,024,859 - +0.2 3,024,879 + +1.4 3,024,985 - +1.1 3,024,985 - +0.1 3,025,323 + ABZR86_RS13495 0.30 -1.5
Or see this region's nucleotide sequence