Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS13490

Experiment: D-Glucosamine Hydrochloride (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS13485 and ABZR86_RS13490 are separated by 35 nucleotidesABZR86_RS13490 and ABZR86_RS13495 are separated by 345 nucleotides ABZR86_RS13485: ABZR86_RS13485 - malate synthase A, at 3,021,564 to 3,023,195 _RS13485 ABZR86_RS13490: ABZR86_RS13490 - isocitrate lyase, at 3,023,231 to 3,024,532 _RS13490 ABZR86_RS13495: ABZR86_RS13495 - YifB family Mg chelatase-like AAA ATPase, at 3,024,878 to 3,026,380 _RS13495 Position (kb) 3023 3024 3025Strain fitness (log2 ratio) -2 -1 0 1 2at 3022.404 kb on + strand, within ABZR86_RS13485at 3022.404 kb on + strand, within ABZR86_RS13485at 3022.404 kb on + strand, within ABZR86_RS13485at 3022.404 kb on + strand, within ABZR86_RS13485at 3022.404 kb on + strand, within ABZR86_RS13485at 3022.405 kb on - strand, within ABZR86_RS13485at 3022.405 kb on - strand, within ABZR86_RS13485at 3022.405 kb on - strand, within ABZR86_RS13485at 3022.405 kb on - strand, within ABZR86_RS13485at 3022.405 kb on - strand, within ABZR86_RS13485at 3022.405 kb on - strand, within ABZR86_RS13485at 3022.405 kb on - strand, within ABZR86_RS13485at 3022.405 kb on - strand, within ABZR86_RS13485at 3022.500 kb on + strand, within ABZR86_RS13485at 3022.500 kb on + strand, within ABZR86_RS13485at 3022.501 kb on - strand, within ABZR86_RS13485at 3022.501 kb on - strand, within ABZR86_RS13485at 3022.501 kb on - strand, within ABZR86_RS13485at 3022.716 kb on + strand, within ABZR86_RS13485at 3022.716 kb on + strand, within ABZR86_RS13485at 3022.716 kb on + strand, within ABZR86_RS13485at 3022.716 kb on + strand, within ABZR86_RS13485at 3022.716 kb on + strand, within ABZR86_RS13485at 3022.716 kb on + strand, within ABZR86_RS13485at 3022.716 kb on + strand, within ABZR86_RS13485at 3022.716 kb on + strand, within ABZR86_RS13485at 3022.716 kb on + strand, within ABZR86_RS13485at 3022.716 kb on + strand, within ABZR86_RS13485at 3022.716 kb on + strand, within ABZR86_RS13485at 3022.716 kb on + strand, within ABZR86_RS13485at 3022.717 kb on - strand, within ABZR86_RS13485at 3022.717 kb on - strand, within ABZR86_RS13485at 3022.717 kb on - strand, within ABZR86_RS13485at 3022.717 kb on - strand, within ABZR86_RS13485at 3022.717 kb on - strand, within ABZR86_RS13485at 3022.717 kb on - strand, within ABZR86_RS13485at 3022.717 kb on - strand, within ABZR86_RS13485at 3022.717 kb on - strand, within ABZR86_RS13485at 3022.717 kb on - strand, within ABZR86_RS13485at 3022.717 kb on - strand, within ABZR86_RS13485at 3022.717 kb on - strand, within ABZR86_RS13485at 3022.717 kb on - strand, within ABZR86_RS13485at 3022.717 kb on - strand, within ABZR86_RS13485at 3022.717 kb on - strand, within ABZR86_RS13485at 3022.717 kb on - strand, within ABZR86_RS13485at 3022.717 kb on - strand, within ABZR86_RS13485at 3022.848 kb on + strand, within ABZR86_RS13485at 3022.848 kb on + strand, within ABZR86_RS13485at 3022.848 kb on + strand, within ABZR86_RS13485at 3022.849 kb on - strand, within ABZR86_RS13485at 3022.849 kb on - strand, within ABZR86_RS13485at 3022.850 kb on + strand, within ABZR86_RS13485at 3023.060 kb on + strandat 3023.061 kb on - strandat 3023.061 kb on - strandat 3023.061 kb on - strandat 3023.061 kb on - strandat 3023.061 kb on - strandat 3023.061 kb on - strandat 3023.178 kb on + strandat 3023.178 kb on + strandat 3023.178 kb on + strandat 3023.178 kb on + strandat 3023.312 kb on + strandat 3023.312 kb on + strandat 3023.312 kb on + strandat 3023.313 kb on - strandat 3023.313 kb on - strandat 3023.313 kb on - strandat 3023.313 kb on - strandat 3023.313 kb on - strandat 3023.313 kb on - strandat 3023.489 kb on + strand, within ABZR86_RS13490at 3023.489 kb on + strand, within ABZR86_RS13490at 3023.490 kb on - strand, within ABZR86_RS13490at 3023.490 kb on - strand, within ABZR86_RS13490at 3023.540 kb on + strand, within ABZR86_RS13490at 3023.540 kb on + strand, within ABZR86_RS13490at 3023.540 kb on + strand, within ABZR86_RS13490at 3023.540 kb on + strand, within ABZR86_RS13490at 3023.540 kb on + strand, within ABZR86_RS13490at 3023.541 kb on - strand, within ABZR86_RS13490at 3023.541 kb on - strand, within ABZR86_RS13490at 3023.558 kb on + strand, within ABZR86_RS13490at 3023.559 kb on - strand, within ABZR86_RS13490at 3024.044 kb on + strand, within ABZR86_RS13490at 3024.044 kb on + strand, within ABZR86_RS13490at 3024.045 kb on - strand, within ABZR86_RS13490at 3024.045 kb on - strand, within ABZR86_RS13490at 3024.155 kb on + strand, within ABZR86_RS13490at 3024.155 kb on + strand, within ABZR86_RS13490at 3024.156 kb on - strand, within ABZR86_RS13490at 3024.156 kb on - strand, within ABZR86_RS13490at 3024.156 kb on - strand, within ABZR86_RS13490at 3024.156 kb on - strand, within ABZR86_RS13490at 3024.242 kb on + strand, within ABZR86_RS13490at 3024.242 kb on + strand, within ABZR86_RS13490at 3024.242 kb on + strand, within ABZR86_RS13490at 3024.242 kb on + strand, within ABZR86_RS13490at 3024.242 kb on + strand, within ABZR86_RS13490at 3024.242 kb on + strand, within ABZR86_RS13490at 3024.243 kb on - strand, within ABZR86_RS13490at 3024.243 kb on - strand, within ABZR86_RS13490at 3024.287 kb on + strand, within ABZR86_RS13490at 3024.287 kb on + strand, within ABZR86_RS13490at 3024.288 kb on - strand, within ABZR86_RS13490at 3024.288 kb on - strand, within ABZR86_RS13490at 3024.288 kb on - strand, within ABZR86_RS13490at 3024.315 kb on - strand, within ABZR86_RS13490at 3024.385 kb on + strand, within ABZR86_RS13490at 3024.386 kb on - strand, within ABZR86_RS13490at 3024.386 kb on - strand, within ABZR86_RS13490at 3024.386 kb on - strand, within ABZR86_RS13490at 3024.422 kb on + strandat 3024.776 kb on + strandat 3024.798 kb on + strandat 3024.799 kb on - strandat 3024.799 kb on - strandat 3024.799 kb on - strandat 3024.799 kb on - strandat 3024.799 kb on - strandat 3024.801 kb on + strandat 3024.802 kb on - strandat 3024.835 kb on + strandat 3024.858 kb on + strandat 3024.859 kb on - strandat 3024.879 kb on + strandat 3024.985 kb on - strandat 3024.985 kb on - strandat 3025.323 kb on + strand, within ABZR86_RS13495

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (N)
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3,022,404 + ABZR86_RS13485 0.51 -0.0
3,022,404 + ABZR86_RS13485 0.51 +0.6
3,022,404 + ABZR86_RS13485 0.51 +0.0
3,022,404 + ABZR86_RS13485 0.51 +1.1
3,022,404 + ABZR86_RS13485 0.51 +0.7
3,022,405 - ABZR86_RS13485 0.52 +0.0
3,022,405 - ABZR86_RS13485 0.52 +0.2
3,022,405 - ABZR86_RS13485 0.52 +0.2
3,022,405 - ABZR86_RS13485 0.52 -0.3
3,022,405 - ABZR86_RS13485 0.52 +0.1
3,022,405 - ABZR86_RS13485 0.52 -0.0
3,022,405 - ABZR86_RS13485 0.52 -0.3
3,022,405 - ABZR86_RS13485 0.52 -0.1
3,022,500 + ABZR86_RS13485 0.57 -0.3
3,022,500 + ABZR86_RS13485 0.57 +0.4
3,022,501 - ABZR86_RS13485 0.57 +1.0
3,022,501 - ABZR86_RS13485 0.57 -0.0
3,022,501 - ABZR86_RS13485 0.57 +0.4
3,022,716 + ABZR86_RS13485 0.71 -0.7
3,022,716 + ABZR86_RS13485 0.71 -0.5
3,022,716 + ABZR86_RS13485 0.71 +0.4
3,022,716 + ABZR86_RS13485 0.71 -0.2
3,022,716 + ABZR86_RS13485 0.71 -0.7
3,022,716 + ABZR86_RS13485 0.71 -0.3
3,022,716 + ABZR86_RS13485 0.71 +0.9
3,022,716 + ABZR86_RS13485 0.71 +0.2
3,022,716 + ABZR86_RS13485 0.71 +0.0
3,022,716 + ABZR86_RS13485 0.71 -0.6
3,022,716 + ABZR86_RS13485 0.71 -0.4
3,022,716 + ABZR86_RS13485 0.71 +1.0
3,022,717 - ABZR86_RS13485 0.71 +0.2
3,022,717 - ABZR86_RS13485 0.71 +0.3
3,022,717 - ABZR86_RS13485 0.71 -0.6
3,022,717 - ABZR86_RS13485 0.71 -0.1
3,022,717 - ABZR86_RS13485 0.71 -0.2
3,022,717 - ABZR86_RS13485 0.71 -0.1
3,022,717 - ABZR86_RS13485 0.71 +0.1
3,022,717 - ABZR86_RS13485 0.71 +0.1
3,022,717 - ABZR86_RS13485 0.71 +0.4
3,022,717 - ABZR86_RS13485 0.71 -2.3
3,022,717 - ABZR86_RS13485 0.71 +0.4
3,022,717 - ABZR86_RS13485 0.71 +0.1
3,022,717 - ABZR86_RS13485 0.71 -0.0
3,022,717 - ABZR86_RS13485 0.71 +0.1
3,022,717 - ABZR86_RS13485 0.71 +0.5
3,022,717 - ABZR86_RS13485 0.71 -1.1
3,022,848 + ABZR86_RS13485 0.79 -0.2
3,022,848 + ABZR86_RS13485 0.79 +0.1
3,022,848 + ABZR86_RS13485 0.79 +0.4
3,022,849 - ABZR86_RS13485 0.79 +0.8
3,022,849 - ABZR86_RS13485 0.79 +0.5
3,022,850 + ABZR86_RS13485 0.79 +0.0
3,023,060 + -0.1
3,023,061 - +0.3
3,023,061 - +1.2
3,023,061 - +0.5
3,023,061 - -1.2
3,023,061 - -0.3
3,023,061 - -1.3
3,023,178 + -0.4
3,023,178 + +1.5
3,023,178 + -0.5
3,023,178 + -1.0
3,023,312 + -1.7
3,023,312 + -0.5
3,023,312 + +0.7
3,023,313 - -0.5
3,023,313 - -0.1
3,023,313 - -0.5
3,023,313 - -0.2
3,023,313 - -0.2
3,023,313 - -0.7
3,023,489 + ABZR86_RS13490 0.20 -0.5
3,023,489 + ABZR86_RS13490 0.20 -0.6
3,023,490 - ABZR86_RS13490 0.20 -0.1
3,023,490 - ABZR86_RS13490 0.20 +0.3
3,023,540 + ABZR86_RS13490 0.24 -1.1
3,023,540 + ABZR86_RS13490 0.24 +0.5
3,023,540 + ABZR86_RS13490 0.24 -0.3
3,023,540 + ABZR86_RS13490 0.24 -0.2
3,023,540 + ABZR86_RS13490 0.24 -0.2
3,023,541 - ABZR86_RS13490 0.24 +0.3
3,023,541 - ABZR86_RS13490 0.24 +0.1
3,023,558 + ABZR86_RS13490 0.25 -0.6
3,023,559 - ABZR86_RS13490 0.25 -0.2
3,024,044 + ABZR86_RS13490 0.62 +0.0
3,024,044 + ABZR86_RS13490 0.62 +0.1
3,024,045 - ABZR86_RS13490 0.63 -0.1
3,024,045 - ABZR86_RS13490 0.63 +0.6
3,024,155 + ABZR86_RS13490 0.71 -0.3
3,024,155 + ABZR86_RS13490 0.71 -0.9
3,024,156 - ABZR86_RS13490 0.71 -0.8
3,024,156 - ABZR86_RS13490 0.71 +0.1
3,024,156 - ABZR86_RS13490 0.71 +0.4
3,024,156 - ABZR86_RS13490 0.71 +0.4
3,024,242 + ABZR86_RS13490 0.78 -0.7
3,024,242 + ABZR86_RS13490 0.78 +0.4
3,024,242 + ABZR86_RS13490 0.78 -0.9
3,024,242 + ABZR86_RS13490 0.78 +0.6
3,024,242 + ABZR86_RS13490 0.78 +0.1
3,024,242 + ABZR86_RS13490 0.78 +0.0
3,024,243 - ABZR86_RS13490 0.78 -0.3
3,024,243 - ABZR86_RS13490 0.78 +0.2
3,024,287 + ABZR86_RS13490 0.81 +2.0
3,024,287 + ABZR86_RS13490 0.81 -0.1
3,024,288 - ABZR86_RS13490 0.81 +0.4
3,024,288 - ABZR86_RS13490 0.81 -0.7
3,024,288 - ABZR86_RS13490 0.81 +0.1
3,024,315 - ABZR86_RS13490 0.83 -0.5
3,024,385 + ABZR86_RS13490 0.89 -0.6
3,024,386 - ABZR86_RS13490 0.89 +0.1
3,024,386 - ABZR86_RS13490 0.89 +0.7
3,024,386 - ABZR86_RS13490 0.89 +0.0
3,024,422 + -0.8
3,024,776 + -2.6
3,024,798 + +0.8
3,024,799 - +0.0
3,024,799 - -0.7
3,024,799 - -0.7
3,024,799 - -0.9
3,024,799 - -0.1
3,024,801 + +0.1
3,024,802 - +0.2
3,024,835 + +0.1
3,024,858 + +0.1
3,024,859 - +0.2
3,024,879 + +1.4
3,024,985 - +1.1
3,024,985 - +0.1
3,025,323 + ABZR86_RS13495 0.30 -1.5

Or see this region's nucleotide sequence