Experiment: D-Glucosamine Hydrochloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS05015 and ABZR86_RS05020 are separated by 28 nucleotides ABZR86_RS05020 and ABZR86_RS05025 are separated by 0 nucleotides ABZR86_RS05025 and ABZR86_RS05030 are separated by 160 nucleotides
ABZR86_RS05015: ABZR86_RS05015 - substrate-binding domain-containing protein, at 1,121,950 to 1,123,206
_RS05015
ABZR86_RS05020: ABZR86_RS05020 - hypothetical protein, at 1,123,235 to 1,123,450
_RS05020
ABZR86_RS05025: ABZR86_RS05025 - hypothetical protein, at 1,123,451 to 1,123,798
_RS05025
ABZR86_RS05030: ABZR86_RS05030 - filamentous haemagglutinin family protein, at 1,123,959 to 1,137,062
_RS05030
Position (kb) 1123
1124 Strain fitness (log2 ratio) -1
0
1 at 1122.498 kb on - strand, within ABZR86_RS05015 at 1122.498 kb on - strand, within ABZR86_RS05015 at 1122.617 kb on + strand, within ABZR86_RS05015 at 1122.618 kb on - strand, within ABZR86_RS05015 at 1122.618 kb on - strand, within ABZR86_RS05015 at 1122.821 kb on + strand, within ABZR86_RS05015 at 1122.821 kb on + strand, within ABZR86_RS05015 at 1122.821 kb on + strand, within ABZR86_RS05015 at 1122.821 kb on + strand, within ABZR86_RS05015 at 1122.821 kb on + strand, within ABZR86_RS05015 at 1122.821 kb on + strand, within ABZR86_RS05015 at 1122.822 kb on - strand, within ABZR86_RS05015 at 1122.822 kb on - strand, within ABZR86_RS05015 at 1122.822 kb on - strand, within ABZR86_RS05015 at 1122.830 kb on + strand, within ABZR86_RS05015 at 1123.011 kb on - strand, within ABZR86_RS05015 at 1123.040 kb on + strand, within ABZR86_RS05015 at 1123.040 kb on + strand, within ABZR86_RS05015 at 1123.040 kb on + strand, within ABZR86_RS05015 at 1123.041 kb on - strand, within ABZR86_RS05015 at 1123.041 kb on - strand, within ABZR86_RS05015 at 1123.041 kb on - strand, within ABZR86_RS05015 at 1123.041 kb on - strand, within ABZR86_RS05015 at 1123.241 kb on + strand at 1123.242 kb on - strand at 1123.242 kb on - strand at 1123.416 kb on + strand, within ABZR86_RS05020 at 1123.416 kb on + strand, within ABZR86_RS05020 at 1123.417 kb on - strand, within ABZR86_RS05020 at 1123.861 kb on - strand at 1124.060 kb on - strand at 1124.060 kb on - strand at 1124.389 kb on + strand at 1124.389 kb on + strand at 1124.390 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (N) remove 1,122,498 - ABZR86_RS05015 0.44 -0.2 1,122,498 - ABZR86_RS05015 0.44 -0.2 1,122,617 + ABZR86_RS05015 0.53 -0.6 1,122,618 - ABZR86_RS05015 0.53 -0.5 1,122,618 - ABZR86_RS05015 0.53 -0.2 1,122,821 + ABZR86_RS05015 0.69 -0.7 1,122,821 + ABZR86_RS05015 0.69 -0.1 1,122,821 + ABZR86_RS05015 0.69 -0.3 1,122,821 + ABZR86_RS05015 0.69 +0.1 1,122,821 + ABZR86_RS05015 0.69 +0.5 1,122,821 + ABZR86_RS05015 0.69 -0.0 1,122,822 - ABZR86_RS05015 0.69 +0.7 1,122,822 - ABZR86_RS05015 0.69 -0.0 1,122,822 - ABZR86_RS05015 0.69 +0.5 1,122,830 + ABZR86_RS05015 0.70 -0.0 1,123,011 - ABZR86_RS05015 0.84 -0.5 1,123,040 + ABZR86_RS05015 0.87 -0.4 1,123,040 + ABZR86_RS05015 0.87 +0.4 1,123,040 + ABZR86_RS05015 0.87 -0.5 1,123,041 - ABZR86_RS05015 0.87 +0.3 1,123,041 - ABZR86_RS05015 0.87 -0.1 1,123,041 - ABZR86_RS05015 0.87 +0.1 1,123,041 - ABZR86_RS05015 0.87 +0.3 1,123,241 + +0.6 1,123,242 - -0.5 1,123,242 - -1.0 1,123,416 + ABZR86_RS05020 0.84 -0.9 1,123,416 + ABZR86_RS05020 0.84 +0.1 1,123,417 - ABZR86_RS05020 0.84 +0.2 1,123,861 - -0.2 1,124,060 - -0.9 1,124,060 - +0.3 1,124,389 + +0.1 1,124,389 + -0.4 1,124,390 - +0.4
Or see this region's nucleotide sequence