Experiment: D-Glucosamine Hydrochloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS03585 and ABZR86_RS03590 are separated by 5 nucleotides ABZR86_RS03590 and ABZR86_RS03595 are separated by 89 nucleotides
ABZR86_RS03585: ABZR86_RS03585 - FdhF/YdeP family oxidoreductase, at 765,018 to 767,342
_RS03585
ABZR86_RS03590: ABZR86_RS03590 - formate dehydrogenase accessory sulfurtransferase FdhD, at 767,348 to 768,166
_RS03590
ABZR86_RS03595: ABZR86_RS03595 - FAD-containing oxidoreductase, at 768,256 to 769,626
_RS03595
Position (kb) 767
768
769 Strain fitness (log2 ratio) -2
-1
0
1 at 766.469 kb on + strand, within ABZR86_RS03585 at 766.470 kb on - strand, within ABZR86_RS03585 at 766.470 kb on - strand, within ABZR86_RS03585 at 766.773 kb on + strand, within ABZR86_RS03585 at 766.773 kb on + strand, within ABZR86_RS03585 at 766.804 kb on + strand, within ABZR86_RS03585 at 766.824 kb on + strand, within ABZR86_RS03585 at 766.825 kb on - strand, within ABZR86_RS03585 at 766.825 kb on - strand, within ABZR86_RS03585 at 766.893 kb on - strand, within ABZR86_RS03585 at 766.998 kb on + strand, within ABZR86_RS03585 at 766.998 kb on + strand, within ABZR86_RS03585 at 766.998 kb on + strand, within ABZR86_RS03585 at 766.999 kb on - strand, within ABZR86_RS03585 at 766.999 kb on - strand, within ABZR86_RS03585 at 767.013 kb on + strand, within ABZR86_RS03585 at 767.013 kb on + strand, within ABZR86_RS03585 at 767.013 kb on + strand, within ABZR86_RS03585 at 767.013 kb on + strand, within ABZR86_RS03585 at 767.013 kb on + strand, within ABZR86_RS03585 at 767.013 kb on + strand, within ABZR86_RS03585 at 767.014 kb on - strand, within ABZR86_RS03585 at 767.014 kb on - strand, within ABZR86_RS03585 at 767.014 kb on - strand, within ABZR86_RS03585 at 767.014 kb on - strand, within ABZR86_RS03585 at 767.014 kb on - strand, within ABZR86_RS03585 at 767.014 kb on - strand, within ABZR86_RS03585 at 767.014 kb on - strand, within ABZR86_RS03585 at 767.014 kb on - strand, within ABZR86_RS03585 at 767.019 kb on + strand, within ABZR86_RS03585 at 767.019 kb on + strand, within ABZR86_RS03585 at 767.144 kb on + strand at 767.144 kb on + strand at 767.165 kb on - strand at 767.217 kb on + strand at 767.217 kb on + strand at 767.217 kb on + strand at 767.218 kb on - strand at 767.218 kb on - strand at 767.218 kb on - strand at 767.283 kb on + strand at 767.284 kb on - strand at 767.453 kb on + strand, within ABZR86_RS03590 at 767.513 kb on + strand, within ABZR86_RS03590 at 767.594 kb on + strand, within ABZR86_RS03590 at 767.594 kb on + strand, within ABZR86_RS03590 at 767.594 kb on + strand, within ABZR86_RS03590 at 767.594 kb on + strand, within ABZR86_RS03590 at 767.594 kb on + strand, within ABZR86_RS03590 at 767.595 kb on - strand, within ABZR86_RS03590 at 767.595 kb on - strand, within ABZR86_RS03590 at 767.595 kb on - strand, within ABZR86_RS03590 at 767.595 kb on - strand, within ABZR86_RS03590 at 767.865 kb on + strand, within ABZR86_RS03590 at 767.866 kb on - strand, within ABZR86_RS03590 at 767.866 kb on - strand, within ABZR86_RS03590 at 767.866 kb on - strand, within ABZR86_RS03590 at 767.866 kb on - strand, within ABZR86_RS03590 at 767.975 kb on + strand, within ABZR86_RS03590 at 767.975 kb on + strand, within ABZR86_RS03590 at 767.975 kb on + strand, within ABZR86_RS03590 at 768.116 kb on + strand at 768.117 kb on - strand at 768.117 kb on - strand at 768.117 kb on - strand at 768.427 kb on + strand, within ABZR86_RS03595 at 768.428 kb on - strand, within ABZR86_RS03595 at 768.428 kb on - strand, within ABZR86_RS03595 at 768.438 kb on + strand, within ABZR86_RS03595 at 768.439 kb on - strand, within ABZR86_RS03595 at 768.439 kb on - strand, within ABZR86_RS03595 at 768.461 kb on - strand, within ABZR86_RS03595 at 768.621 kb on + strand, within ABZR86_RS03595 at 768.793 kb on + strand, within ABZR86_RS03595 at 768.793 kb on + strand, within ABZR86_RS03595 at 768.793 kb on + strand, within ABZR86_RS03595 at 768.793 kb on + strand, within ABZR86_RS03595 at 768.793 kb on + strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.795 kb on + strand, within ABZR86_RS03595 at 768.795 kb on + strand, within ABZR86_RS03595 at 768.796 kb on - strand, within ABZR86_RS03595 at 769.053 kb on - strand, within ABZR86_RS03595 at 769.068 kb on + strand, within ABZR86_RS03595 at 769.161 kb on + strand, within ABZR86_RS03595 at 769.161 kb on + strand, within ABZR86_RS03595
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (N) remove 766,469 + ABZR86_RS03585 0.62 +0.1 766,470 - ABZR86_RS03585 0.62 +0.1 766,470 - ABZR86_RS03585 0.62 -0.2 766,773 + ABZR86_RS03585 0.75 -0.9 766,773 + ABZR86_RS03585 0.75 +0.1 766,804 + ABZR86_RS03585 0.77 +0.3 766,824 + ABZR86_RS03585 0.78 +0.7 766,825 - ABZR86_RS03585 0.78 +0.4 766,825 - ABZR86_RS03585 0.78 -0.7 766,893 - ABZR86_RS03585 0.81 -0.4 766,998 + ABZR86_RS03585 0.85 -0.1 766,998 + ABZR86_RS03585 0.85 -1.1 766,998 + ABZR86_RS03585 0.85 -0.2 766,999 - ABZR86_RS03585 0.85 +0.4 766,999 - ABZR86_RS03585 0.85 -0.1 767,013 + ABZR86_RS03585 0.86 -0.1 767,013 + ABZR86_RS03585 0.86 +0.6 767,013 + ABZR86_RS03585 0.86 +0.5 767,013 + ABZR86_RS03585 0.86 +0.2 767,013 + ABZR86_RS03585 0.86 +0.4 767,013 + ABZR86_RS03585 0.86 -0.5 767,014 - ABZR86_RS03585 0.86 +0.3 767,014 - ABZR86_RS03585 0.86 -0.3 767,014 - ABZR86_RS03585 0.86 +0.2 767,014 - ABZR86_RS03585 0.86 +0.3 767,014 - ABZR86_RS03585 0.86 -0.0 767,014 - ABZR86_RS03585 0.86 -0.3 767,014 - ABZR86_RS03585 0.86 +0.2 767,014 - ABZR86_RS03585 0.86 +0.1 767,019 + ABZR86_RS03585 0.86 -0.6 767,019 + ABZR86_RS03585 0.86 -0.3 767,144 + +0.1 767,144 + +0.4 767,165 - +0.3 767,217 + +0.8 767,217 + -0.4 767,217 + +0.3 767,218 - +0.1 767,218 - -0.4 767,218 - -0.8 767,283 + +0.1 767,284 - -0.7 767,453 + ABZR86_RS03590 0.13 +1.6 767,513 + ABZR86_RS03590 0.20 -0.3 767,594 + ABZR86_RS03590 0.30 -0.7 767,594 + ABZR86_RS03590 0.30 +0.9 767,594 + ABZR86_RS03590 0.30 +0.7 767,594 + ABZR86_RS03590 0.30 +0.7 767,594 + ABZR86_RS03590 0.30 +0.2 767,595 - ABZR86_RS03590 0.30 -0.9 767,595 - ABZR86_RS03590 0.30 +0.1 767,595 - ABZR86_RS03590 0.30 -0.5 767,595 - ABZR86_RS03590 0.30 +0.3 767,865 + ABZR86_RS03590 0.63 -0.7 767,866 - ABZR86_RS03590 0.63 +0.3 767,866 - ABZR86_RS03590 0.63 -0.3 767,866 - ABZR86_RS03590 0.63 -1.7 767,866 - ABZR86_RS03590 0.63 -0.2 767,975 + ABZR86_RS03590 0.77 -0.7 767,975 + ABZR86_RS03590 0.77 +0.6 767,975 + ABZR86_RS03590 0.77 +0.2 768,116 + -0.4 768,117 - -0.0 768,117 - -0.2 768,117 - +0.2 768,427 + ABZR86_RS03595 0.12 -0.4 768,428 - ABZR86_RS03595 0.13 +0.4 768,428 - ABZR86_RS03595 0.13 -0.4 768,438 + ABZR86_RS03595 0.13 +0.0 768,439 - ABZR86_RS03595 0.13 -0.3 768,439 - ABZR86_RS03595 0.13 +0.3 768,461 - ABZR86_RS03595 0.15 -0.3 768,621 + ABZR86_RS03595 0.27 -0.3 768,793 + ABZR86_RS03595 0.39 -0.1 768,793 + ABZR86_RS03595 0.39 -0.1 768,793 + ABZR86_RS03595 0.39 +0.1 768,793 + ABZR86_RS03595 0.39 -0.2 768,793 + ABZR86_RS03595 0.39 -1.0 768,794 - ABZR86_RS03595 0.39 -0.0 768,794 - ABZR86_RS03595 0.39 -1.0 768,794 - ABZR86_RS03595 0.39 -0.2 768,794 - ABZR86_RS03595 0.39 -0.4 768,794 - ABZR86_RS03595 0.39 +0.0 768,794 - ABZR86_RS03595 0.39 +0.3 768,794 - ABZR86_RS03595 0.39 +0.4 768,794 - ABZR86_RS03595 0.39 -2.0 768,795 + ABZR86_RS03595 0.39 -0.1 768,795 + ABZR86_RS03595 0.39 -0.7 768,796 - ABZR86_RS03595 0.39 +0.8 769,053 - ABZR86_RS03595 0.58 -0.6 769,068 + ABZR86_RS03595 0.59 -0.1 769,161 + ABZR86_RS03595 0.66 -0.3 769,161 + ABZR86_RS03595 0.66 +0.8
Or see this region's nucleotide sequence