Experiment: D-Glucosamine Hydrochloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS03295 and ABZR86_RS03300 are separated by 1 nucleotides ABZR86_RS03300 and ABZR86_RS03305 are separated by 67 nucleotides
ABZR86_RS03295: ABZR86_RS03295 - DUF4255 domain-containing protein, at 693,306 to 693,962
_RS03295
ABZR86_RS03300: ABZR86_RS03300 - hypothetical protein, at 693,964 to 694,983
_RS03300
ABZR86_RS03305: ABZR86_RS03305 - phage tail sheath C-terminal domain-containing protein, at 695,051 to 696,439
_RS03305
Position (kb) 693
694
695 Strain fitness (log2 ratio) -1
0
1 at 693.175 kb on + strand at 693.175 kb on + strand at 693.176 kb on - strand at 693.367 kb on - strand at 693.615 kb on + strand, within ABZR86_RS03295 at 693.616 kb on - strand, within ABZR86_RS03295 at 693.772 kb on - strand, within ABZR86_RS03295 at 693.843 kb on + strand, within ABZR86_RS03295 at 693.844 kb on - strand, within ABZR86_RS03295 at 693.921 kb on - strand at 693.989 kb on - strand at 693.989 kb on - strand at 694.024 kb on + strand at 694.024 kb on + strand at 694.282 kb on + strand, within ABZR86_RS03300 at 694.282 kb on + strand, within ABZR86_RS03300 at 694.712 kb on + strand, within ABZR86_RS03300 at 694.820 kb on - strand, within ABZR86_RS03300 at 694.975 kb on + strand at 694.976 kb on - strand at 694.976 kb on - strand at 694.981 kb on + strand at 694.981 kb on + strand at 694.981 kb on + strand at 694.982 kb on - strand at 695.044 kb on - strand at 695.057 kb on + strand at 695.075 kb on + strand at 695.352 kb on - strand, within ABZR86_RS03305 at 695.366 kb on + strand, within ABZR86_RS03305 at 695.393 kb on + strand, within ABZR86_RS03305 at 695.393 kb on + strand, within ABZR86_RS03305 at 695.394 kb on - strand, within ABZR86_RS03305 at 695.414 kb on + strand, within ABZR86_RS03305 at 695.414 kb on + strand, within ABZR86_RS03305 at 695.507 kb on + strand, within ABZR86_RS03305 at 695.508 kb on - strand, within ABZR86_RS03305 at 695.508 kb on - strand, within ABZR86_RS03305 at 695.823 kb on - strand, within ABZR86_RS03305 at 695.823 kb on - strand, within ABZR86_RS03305 at 695.943 kb on - strand, within ABZR86_RS03305 at 695.943 kb on - strand, within ABZR86_RS03305
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (N) remove 693,175 + -0.8 693,175 + -0.7 693,176 - +0.3 693,367 - +0.3 693,615 + ABZR86_RS03295 0.47 +1.5 693,616 - ABZR86_RS03295 0.47 -0.3 693,772 - ABZR86_RS03295 0.71 +0.4 693,843 + ABZR86_RS03295 0.82 +0.7 693,844 - ABZR86_RS03295 0.82 +0.2 693,921 - +1.3 693,989 - +0.4 693,989 - +0.1 694,024 + +0.3 694,024 + -0.8 694,282 + ABZR86_RS03300 0.31 +0.0 694,282 + ABZR86_RS03300 0.31 +0.2 694,712 + ABZR86_RS03300 0.73 -0.8 694,820 - ABZR86_RS03300 0.84 +0.1 694,975 + -0.5 694,976 - -0.8 694,976 - -0.2 694,981 + +0.6 694,981 + -0.1 694,981 + -0.6 694,982 - +0.0 695,044 - +0.5 695,057 + +0.5 695,075 + -0.9 695,352 - ABZR86_RS03305 0.22 -0.1 695,366 + ABZR86_RS03305 0.23 -0.8 695,393 + ABZR86_RS03305 0.25 -0.1 695,393 + ABZR86_RS03305 0.25 +0.2 695,394 - ABZR86_RS03305 0.25 -1.3 695,414 + ABZR86_RS03305 0.26 +0.3 695,414 + ABZR86_RS03305 0.26 +0.9 695,507 + ABZR86_RS03305 0.33 -0.3 695,508 - ABZR86_RS03305 0.33 -0.4 695,508 - ABZR86_RS03305 0.33 -0.6 695,823 - ABZR86_RS03305 0.56 -0.1 695,823 - ABZR86_RS03305 0.56 +0.1 695,943 - ABZR86_RS03305 0.64 -0.1 695,943 - ABZR86_RS03305 0.64 -0.2
Or see this region's nucleotide sequence